| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1388 |
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| Symbol | |
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| ID | 3908338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1579445 |
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| End bp | 1580251 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637883282 |
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| Product | two-component response regulator |
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| Protein accession | YP_485009 |
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| Protein GI | 86748513 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
[COG4565] Response regulator of citrate/malate metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.740256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGAT CGCAGTTGGT TGCTGAGCAT TTACCGTTGT TGCGCCGCTA TGCGCGGGCT
TTGACCGGCA ACCAGGCGTC GGGTGACGCC TATGTCGGCG CAATGCTTGA AGCGCTGCTT
CAGGATCCGG CGTTGCTCGA CGAAAGGCAC GGTCCGCGGG CGGGGCTTTT TCGTCTGTTC
GCTCAGATCT GGAACTCGGT GGCGCTCAAC GACGATTCCG AGGTTCGCTC GCTGCCGATG
CCCTCCGAGC GTCGGCTCTC GGCGATCACC CCGCTGCCGC GGCAGGCCTT CCTGCTGCTC
TCGCTGGAAG GGTTTTCTGA AGAAGAAGTC GCCTTCGTTC TTCACACCGA TGTCGGCGAA
ATCCGTCAGC TCGCCGATAC GGCCGGCCGG GAGATGGCCG AGGAGATCGC CACCGACGTT
CTGATCATCG AGGACGAGAC CTTCATTGCG ATGGATCTCG AAAGCCTCGT CAAGAACCTC
GGCCACAATG TCATTGGCGT TGCACGCACT CACGCTGACG CGATCGCCCT GGCGCGCACC
AAGAAGCCGG GGCTGATCCT CGCAGACATC CAGCTTGCCG ACGGCAGTTC CGGTCTGGAT
GCCGTCAACG AATTGCTGAA GACGTTCGAG GTGCCGGTGG TGTTCATCAC GGCCTATCCG
GAGCGTTTCC TGACCGGCGA ACGCCCCGAG CCGGCGTTCC TGATCTCGAA GCCGTTCCAG
CCCGCGATGG TGTCCGCCGT TGCGAGTCAG GCCCTGTTCT TCCAGCGCAA TTCGCGCAAC
CGGACCCCGA ACGCCGCCGC ATCCTGA
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| Protein sequence | MSRSQLVAEH LPLLRRYARA LTGNQASGDA YVGAMLEALL QDPALLDERH GPRAGLFRLF
AQIWNSVALN DDSEVRSLPM PSERRLSAIT PLPRQAFLLL SLEGFSEEEV AFVLHTDVGE
IRQLADTAGR EMAEEIATDV LIIEDETFIA MDLESLVKNL GHNVIGVART HADAIALART
KKPGLILADI QLADGSSGLD AVNELLKTFE VPVVFITAYP ERFLTGERPE PAFLISKPFQ
PAMVSAVASQ ALFFQRNSRN RTPNAAAS
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