Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1377 |
Symbol | |
ID | 3908482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1569552 |
End bp | 1570271 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637883271 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_484998 |
Protein GI | 86748502 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCACC TCGCTTTTCC GAACTCGACT TGCGACGGGT TTCGTTGCGC GACGCATTGC GCTGTGCGCC CGCTGGCGAT CTGCGGCGAG CTCGAGCAGG CCGAACACGA GGAGTTCGAG CGCCTCGCGC AGCATGTTCG CTACGGCGCG AAGGAAGCCT TGTTCTCCGA GGACGAAACC GCCGACGCCG TCTACAGTCT GGTCGAAGGC ATCGCCCGGC TCTACAAGCT GCTGCCCGAC GGCCGACGCC AGATCATCGG ATTCGCGCTG CCGGGCGATT TTCTCGGCAT GGCGCCGTCC GCGCGGTACT CATTCTCGGC CGATTCGATC GGCGGCGTGA CCGTCTGCAA GTTCTTCCGC GGTCCGTTTC TGCGCTTCAT TGAAAACAGG CCGCACATGC TGATGCGAAT GAACGAATTC GCGACCCGGG AGCTCAGCCT TGCGCAGGAT CAGATGCTGC TGCTCGGTCG GCGTTCGGCC GAAGAGAAGG TTGCAGCCTT CCTGGTCGCC TGGCGGGATC GGCTGGCGCG ACTGGAAGGC GTCACAAAGA CCGTCAGCCT GCCGATGGGC CGGCAGGACA TCGCCGACTT CCTCGGCCTC ACGATCGAAA CCGTGAGCCG CACCTTCACC AAGCTGGAGC GCGAAAAGCT CATCGTGATC GTGCCGGACG GGGTTCGCGT CCTCGATCCG AAGCGCTTCG ACGCCCTCGC TGCGGCCTGA
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Protein sequence | MPHLAFPNST CDGFRCATHC AVRPLAICGE LEQAEHEEFE RLAQHVRYGA KEALFSEDET ADAVYSLVEG IARLYKLLPD GRRQIIGFAL PGDFLGMAPS ARYSFSADSI GGVTVCKFFR GPFLRFIENR PHMLMRMNEF ATRELSLAQD QMLLLGRRSA EEKVAAFLVA WRDRLARLEG VTKTVSLPMG RQDIADFLGL TIETVSRTFT KLEREKLIVI VPDGVRVLDP KRFDALAAA
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