Gene RPB_1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1377 
Symbol 
ID3908482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1569552 
End bp1570271 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content64% 
IMG OID637883271 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_484998 
Protein GI86748502 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACC TCGCTTTTCC GAACTCGACT TGCGACGGGT TTCGTTGCGC GACGCATTGC 
GCTGTGCGCC CGCTGGCGAT CTGCGGCGAG CTCGAGCAGG CCGAACACGA GGAGTTCGAG
CGCCTCGCGC AGCATGTTCG CTACGGCGCG AAGGAAGCCT TGTTCTCCGA GGACGAAACC
GCCGACGCCG TCTACAGTCT GGTCGAAGGC ATCGCCCGGC TCTACAAGCT GCTGCCCGAC
GGCCGACGCC AGATCATCGG ATTCGCGCTG CCGGGCGATT TTCTCGGCAT GGCGCCGTCC
GCGCGGTACT CATTCTCGGC CGATTCGATC GGCGGCGTGA CCGTCTGCAA GTTCTTCCGC
GGTCCGTTTC TGCGCTTCAT TGAAAACAGG CCGCACATGC TGATGCGAAT GAACGAATTC
GCGACCCGGG AGCTCAGCCT TGCGCAGGAT CAGATGCTGC TGCTCGGTCG GCGTTCGGCC
GAAGAGAAGG TTGCAGCCTT CCTGGTCGCC TGGCGGGATC GGCTGGCGCG ACTGGAAGGC
GTCACAAAGA CCGTCAGCCT GCCGATGGGC CGGCAGGACA TCGCCGACTT CCTCGGCCTC
ACGATCGAAA CCGTGAGCCG CACCTTCACC AAGCTGGAGC GCGAAAAGCT CATCGTGATC
GTGCCGGACG GGGTTCGCGT CCTCGATCCG AAGCGCTTCG ACGCCCTCGC TGCGGCCTGA
 
Protein sequence
MPHLAFPNST CDGFRCATHC AVRPLAICGE LEQAEHEEFE RLAQHVRYGA KEALFSEDET 
ADAVYSLVEG IARLYKLLPD GRRQIIGFAL PGDFLGMAPS ARYSFSADSI GGVTVCKFFR
GPFLRFIENR PHMLMRMNEF ATRELSLAQD QMLLLGRRSA EEKVAAFLVA WRDRLARLEG
VTKTVSLPMG RQDIADFLGL TIETVSRTFT KLEREKLIVI VPDGVRVLDP KRFDALAAA