Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1319 |
Symbol | |
ID | 3907827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1503867 |
End bp | 1505225 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637883213 |
Product | hypothetical protein |
Protein accession | YP_484940 |
Protein GI | 86748444 |
COG category | [S] Function unknown |
COG ID | [COG4222] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.135958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAAAC TGCTGCTCGG CTCGGCCGCA ATTCTGGCAC TGGCGTCATC CGCCGCGGTT GCGCAATCCG AAGGCGAATT TCCCGCGACC CTGGCGGGTC ACGCGGTGAT GCCCGCGGCG TCGTTCATCG ACGCGCCGGC GGATGCGCCC GCCGACCTCA AGAACGCCGG CAAATACACC ACCGGCAAGC GCGTCGAAGC GACCGGCACC GTGATGGGCA AATCCAAGGA ACGGCCGACC GGCCTGTCGC TGCCGTTCAG CGGCCAGCCG CTGCAGGGCA ACTCCGGCAT CAAGAAGATG GACGACGGCA GCTTTTGGGT GCTGACCGAC AACGGCTTCG GCTCGCGCTA CAATTCGGCC GACGCCATGC TGTTTCTCAG CCACCTGAAG ATCGACTGGG CCGGCAGCAA GGTCGACCGC GTCGCCACCG TGTTCCTGCA CGATCCCGAC AAGAAGGTGC CGTTCCGCAT CGTTCACGAG AACACCGACA AGCGCTATCT GACCGGCGCC GATTTCGACA CCGAAGGCTT CCAGATCATC GGCGACCGCA TCTGGATCGG CGAAGAGTTC GGCCCGTATC TGATCGAGAC CGACATGAGC GGCAAGGTGC TGGGCGTGTA CGAGACCACC GCCGACGACA AGCCGGTGAA GTCGCCGGAT CATTGGTCGG TGCAGTCGCC CGGCGCGCCC GGCGCGAGCT ACAACGCCAC CGTCAACCTG AAGCGCTCCA AGGGCTACGA AGGCTTCGCT GCCTCCAAGG ACGGCAAGTT CCTGTACGGC CTGCTCGAAG GCCCGCTGTG GGACGCCGGG AAGAAGGACT GGGAGAAGGT CGACGGCAAG GAAGCCGCGC GCATCCTGGA ATTCGACGTC GCGCAGAAGA AGTTCACCGG CCGCTTCTGG ACCTACGTGT TCGAGCAGAA CGGCAATGCG ATCGGCGACT TCAACATGAT CGACGCCAGC CATGGCCTGA TCATCGAGCG CGACGACGGC GAAGGCACGC CCGACAAGGC CTGCGCCGCC GGCACCCGCG GCACCGACTG CTTCCCGGAC CTGCCGAAAT TCAAGCGGGT GGTGAAGGTC GAACTCAGCG ACGCCAATGT CGGCAAGCCG GTGCGCAAGA TCGGCTATAT CGACCTGCTG AAGATCCGCG ATCCGGACAA GAAGGCGAAG AAGCCGCTGA CCGACGGCGC GCTGGCGTTC CCGTTCTTCA CCATCGAGAA CGTCGACAAG GTCGACGACC GCCACATCAT CGTCGGCAAC GACAACAACC TGCCGTTCTC GTCGAGCCGC GATCCCAACA AGGCCGACGA CAATGAATTC GTGCTGCTCG AAGTCGCCGA CTTCCTGAAG GCGAATTAA
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Protein sequence | MRKLLLGSAA ILALASSAAV AQSEGEFPAT LAGHAVMPAA SFIDAPADAP ADLKNAGKYT TGKRVEATGT VMGKSKERPT GLSLPFSGQP LQGNSGIKKM DDGSFWVLTD NGFGSRYNSA DAMLFLSHLK IDWAGSKVDR VATVFLHDPD KKVPFRIVHE NTDKRYLTGA DFDTEGFQII GDRIWIGEEF GPYLIETDMS GKVLGVYETT ADDKPVKSPD HWSVQSPGAP GASYNATVNL KRSKGYEGFA ASKDGKFLYG LLEGPLWDAG KKDWEKVDGK EAARILEFDV AQKKFTGRFW TYVFEQNGNA IGDFNMIDAS HGLIIERDDG EGTPDKACAA GTRGTDCFPD LPKFKRVVKV ELSDANVGKP VRKIGYIDLL KIRDPDKKAK KPLTDGALAF PFFTIENVDK VDDRHIIVGN DNNLPFSSSR DPNKADDNEF VLLEVADFLK AN
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