Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1305 |
Symbol | |
ID | 3908178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1486929 |
End bp | 1488068 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637883199 |
Product | L-lactate dehydrogenase (cytochrome) |
Protein accession | YP_484926 |
Protein GI | 86748430 |
COG category | [C] Energy production and conversion |
COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.304754 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATACA TCACCTGCAT CGAGGACCTT CGCCAGATTC ACAAGCGGCG GGTGCCGAAG ATGTTCTTCG ACTATGTCGA CCACGGCTCC TATGCCGAGG AGACGCTCCG CGCCAATGTC GACGACCTGA AGCGGATCAA GTTCCGCCAG CGCATCCTGG TCGACATCTC CAAGCGCGAT CTGTCCACCA CCATCATCGG CGAGAAGTCG GCGATGCCGC TGATCCTGGC GCCGGTCGGC TCCACCGGGA TGCAATATGG CGACGGCGAG ATCCACGCCT GCCGCGCCGC CCAGGCCGCC GGCATCCCCT ACACGTTGTC GACGATGTCG ATCTGCTCGA TCGAGGACGT CGCGGCGAAT GTCGACAAGC CGTTCTGGTT TCAGCTCTAC GTCATGAAGG ACCGCGGCTT CGTCAAGGCG CTGATCGAGC GCGCGATCGC GGCCAAATGC AGCGCGCTGG TGCTGACCGT CGACCTGCAG GTGATCGGCC AGCGCCATCA GGACATCAAG AACGGCATGA CGGTGCCGCC GGAGATCTTC CGGCCGAAGA ACCTGCTCGA CATCGCCACC AAGCCCGGCT GGGTGAAGGG CATCCTCGGC GCCAAGCAGC GCAATTTCGG CAACATCGCC GGGCACCTGC CCGGCTCCAA GGATCTGGAA TCGGTGTCGG CCTGGGTGGC GTCGCAATTC GACGCCTCGC TGAACTGGAA GGACATCGAC TGGATCCGCT CGATCTGGCC GGGCAAGCTG ATCATCAAGG GCATCCTCGA CGTCGAGGAT GCCCGCGAGG CGGTGAAGGT CGGCGCCGAG GCGCTGGTGG TGTCGAACCA TGGCGGCCGC CAGCTCGACG GCGCGCCGTC GTCGATCGAG GTGCTGCCGG AGATCGTCCA CACCGTCGGC TCACATATCG AGGTGATGTT CGACGGCGGC ATCCGCTCCG GCCAGGACGT GATGCGAGCG CTGGCGCTCG GCGCGCGCAG CTGCATGATC GGCCGCGCCT ACATCTACGG CCTCGGCGCC TATGGCGGCC CCGGCGTCGC CAAGGCGATC GACATCATCG GCAAGGAGCT GTCGACCACC ATGGGCCTGT GCGGCGTCAA TGCGATCAAC CAGATCGACG AGAAGGTGCT GGCGGAGTAA
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Protein sequence | MKYITCIEDL RQIHKRRVPK MFFDYVDHGS YAEETLRANV DDLKRIKFRQ RILVDISKRD LSTTIIGEKS AMPLILAPVG STGMQYGDGE IHACRAAQAA GIPYTLSTMS ICSIEDVAAN VDKPFWFQLY VMKDRGFVKA LIERAIAAKC SALVLTVDLQ VIGQRHQDIK NGMTVPPEIF RPKNLLDIAT KPGWVKGILG AKQRNFGNIA GHLPGSKDLE SVSAWVASQF DASLNWKDID WIRSIWPGKL IIKGILDVED AREAVKVGAE ALVVSNHGGR QLDGAPSSIE VLPEIVHTVG SHIEVMFDGG IRSGQDVMRA LALGARSCMI GRAYIYGLGA YGGPGVAKAI DIIGKELSTT MGLCGVNAIN QIDEKVLAE
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