Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1297 |
Symbol | |
ID | 3908170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1479172 |
End bp | 1480374 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637883191 |
Product | aspartate aminotransferase |
Protein accession | YP_484918 |
Protein GI | 86748422 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.216369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTCC TGTCCACCGC GCTCGATCGT GTGAAGCCGT CCGCGACCAT CGCGGTCACG GACAAGGCAC GTGAGCTGAA AGCGGCGGGC CGCAACGTCA TCGGGCTCGG CTCCGGCGAG CCGGATTTCG ACACGCCCGC CAACATCAAG CTGGCGGCGA TCCACGCCAT CGAGGCCGGC AAGACCAAGT ACACCGCGGT CGACGGCATT CCGGAGCTGA AGCAGGCGAT CATCGACAAG TTTCAGCGCG AGAACGGCCT GACCTACAAG CCCAACCAGA TCATCGTCGG CACCGGCGGC AAGCAGGTGC TGTACAACGC GCTGATCGCC ACCATCAATC CCGGCGACGA GGTGATCATC CCGGCGCCGT ATTGGGTCAG CTATCCGGAA ATGGTGGCGC TCGCCGGCGG CGAGTCGGTG CCGGTGGTGT GCCCGGCGGA ATCCGGCTTC AAGCTGCAGC CGGCGGCGCT GGAGGCAGCG ATTACGCCGA AGACCAAGTG GATCATTCTC AATTCGCCGT CGAACCCGAC CGGCGCCGCC TATTCGCGCG AAGAGTTGAA GGCGCTCACC GACGTGCTGG TCAAGCATCC GCACGTCTGG GTGATGACCG ACGACATGTA CGAGCATCTC GTCTACGACG ATTTCGACTT CACCACCCCG GCGCAGATCG AGCCGCGTCT GTTCGATCGC ACGCTGACCG TGAACGGCGT GTCGAAATCC TATTGTATGA CCGGCTGGCG GATCGGCTAT GCGGGCGGCC CGGCGCAATT GATCAAGGCG ATGGCGACGA TCCAGTCGCA GTCGACCTCG AACCCGTCCT CGATCGCCCA ATGGGCGGCG GTGGAAGCGC TCAACGGCCC GCAGGACTTC ATCGCCGCCC ACAACAAGGT GTTCAAGGAG CGCCGCGACC TCGTGGTGTC GATGCTGAAC CAGGCGTCGG GGATCGATTG CCCGCGGCCG GAAGGGGCGT TCTACGTCTA TCCGTCCTGC GCCGGCACGA TCGGCAAGAC CGCGCCGTCC GGCAAGGTCA TCGAGACCGA TCAGGACTTC GTCACCGAGC TGCTCGAAGC CGAGGGCGTC GCGGTGGTGC AGGGCTCGGC GTTCGGCCTC GGCCCGGCGT TCCGGATTTC CTACGCGACG AAAACCTCGG ATCTCGAAGA AGCCTGCAAG CGCATCCAGC GCTTTTGCGG GAACCTGCGC TGA
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Protein sequence | MSFLSTALDR VKPSATIAVT DKARELKAAG RNVIGLGSGE PDFDTPANIK LAAIHAIEAG KTKYTAVDGI PELKQAIIDK FQRENGLTYK PNQIIVGTGG KQVLYNALIA TINPGDEVII PAPYWVSYPE MVALAGGESV PVVCPAESGF KLQPAALEAA ITPKTKWIIL NSPSNPTGAA YSREELKALT DVLVKHPHVW VMTDDMYEHL VYDDFDFTTP AQIEPRLFDR TLTVNGVSKS YCMTGWRIGY AGGPAQLIKA MATIQSQSTS NPSSIAQWAA VEALNGPQDF IAAHNKVFKE RRDLVVSMLN QASGIDCPRP EGAFYVYPSC AGTIGKTAPS GKVIETDQDF VTELLEAEGV AVVQGSAFGL GPAFRISYAT KTSDLEEACK RIQRFCGNLR
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