| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1281 |
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| Symbol | |
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| ID | 3908154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1465530 |
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| End bp | 1466639 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637883175 |
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| Product | deoxyribonuclease |
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| Protein accession | YP_484902 |
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| Protein GI | 86748406 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCT TCACCCCGAT CCAGGACGAC GCGCTGAAAG CCGTCGCTGC CTGGCTGAAA
GCCAAGCCCG GCCGAGGCGG CACGCCGCTG GTGTTCCGGC TGTTCGGCTA TGCCGGCACC
GGCAAGACCA CGCTGGCGCG CGAGATCGCC GAGGGCGTGT CGGGCGAGGT GAAGTTCGCC
GCCTTCACCG GCAAGGCCGC GCTGGTGATG CGCAACAAGG GCTGCGACGA CGCCTCGACG
ATTCATTCGC TGATCTATCG CACCAAGGAG TCGGGCGTCG AGCAGCCGAG CTTCGAATTG
TGGGACGACG CCCCGGCGTC GAAGGCCAAG CTGATCGTGA TCGACGAATG CTCGATGGTC
GACGAGGAAC TCGGCCGCGA CCTGATGTCG TTCGATTGCC CGCTGCTGGT GCTCGGCGAT
CCGGCGCAGT TGCCGCCGAT CCAGGGCGGC GGCTATTTCA CCGATTGCGA GCCCGACGTG
ATGCTCACCG AGGTGCATCG CCAGGCGCAG GACGATCCGA TCGTGCGGCT GTCGATGGAC
GTGCGCGAAG GCCGCCGTCT CGAACTCGGC CGCTACGGCG AGACCGAAGT GGTGACGCGC
GACAGCCTCG ATCCGCAGCG GGTGATGGAC GCCGACCAGG TGCTGGTCGG CCGCAACAAC
ACAAGGCGCG CCTACAACGC CCGCTTCCGC CAGCGCCTGA ACATCGAGGA CCCGCTGCCG
GTCGGCGGCG ACAAGCTGGT GTGCCTGCGC AACAACCGCA AGAAGGCGCT GTTCAACGGC
GGCCTGTGGC GGGTGAAGTC GCGGGCGCCG ACCAAGTCGA AGATCATCAC CCTGCGGGTG
ACGCCGGACG AGGATTTCGG CGGCCGGCTC ACCAAGGTGT CGGTCCGCAA CGAGTGCTTC
GCCGGGGGCA TCGAGGACAT CTCGTGGGAT CAGCGCAAGC CCTATGACGA GTTCGACTAC
GGCTATGTGC TCACCGTGCA CAAGAGCCAG GGCTCGCAAT GGGACGACGT CGTGCTGTTC
GACGAAAGCT TCGCCTTCCA GGACAGCCGC GCCCGCTGGC TCTACACCGG CATCACGCGA
GCCGCGAAGC GGCTGAGCGT GGTGGTGTGA
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| Protein sequence | MTTFTPIQDD ALKAVAAWLK AKPGRGGTPL VFRLFGYAGT GKTTLAREIA EGVSGEVKFA
AFTGKAALVM RNKGCDDAST IHSLIYRTKE SGVEQPSFEL WDDAPASKAK LIVIDECSMV
DEELGRDLMS FDCPLLVLGD PAQLPPIQGG GYFTDCEPDV MLTEVHRQAQ DDPIVRLSMD
VREGRRLELG RYGETEVVTR DSLDPQRVMD ADQVLVGRNN TRRAYNARFR QRLNIEDPLP
VGGDKLVCLR NNRKKALFNG GLWRVKSRAP TKSKIITLRV TPDEDFGGRL TKVSVRNECF
AGGIEDISWD QRKPYDEFDY GYVLTVHKSQ GSQWDDVVLF DESFAFQDSR ARWLYTGITR
AAKRLSVVV
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