Gene RPB_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1258 
Symbol 
ID3909192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1440033 
End bp1440377 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content68% 
IMG OID637883152 
Productputative formamidase regulatory protein FmdB 
Protein accessionYP_484879 
Protein GI86748383 
COG category 
COG ID 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.973903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.160938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTCT ATGAATACAT GTGCGACGCC TGCGGGCCGT TCACCGATCT GCGGCCGATG 
GCCGAATACG AGGCGCCGCA GCCGTGCCCG GTGTGCGAAA CCTCGTCGCC GCGGGTGCTG
CTCACCGCGC CGAACTTCTC CTGCATGCCG GCGTCGCAGC GCAATGCGCA CGCCACCAAC
GAGAAGAGCA AGCACGCGCC GATGAGCGTC GGCGAATACA AGGCCAAGCA CGCGCCGGGC
TGCGGCTGCT GCTCCGGCCT GAAGAAGCCG GCGCGGTTGC AGACCCGCAC CAAGAGCGGC
GCCAAGGGCT TTCCGACGGC GCGGCCGTGG ATGATCAGCC ACTGA
 
Protein sequence
MPVYEYMCDA CGPFTDLRPM AEYEAPQPCP VCETSSPRVL LTAPNFSCMP ASQRNAHATN 
EKSKHAPMSV GEYKAKHAPG CGCCSGLKKP ARLQTRTKSG AKGFPTARPW MISH