Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1258 |
Symbol | |
ID | 3909192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1440033 |
End bp | 1440377 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637883152 |
Product | putative formamidase regulatory protein FmdB |
Protein accession | YP_484879 |
Protein GI | 86748383 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.973903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.160938 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTCT ATGAATACAT GTGCGACGCC TGCGGGCCGT TCACCGATCT GCGGCCGATG GCCGAATACG AGGCGCCGCA GCCGTGCCCG GTGTGCGAAA CCTCGTCGCC GCGGGTGCTG CTCACCGCGC CGAACTTCTC CTGCATGCCG GCGTCGCAGC GCAATGCGCA CGCCACCAAC GAGAAGAGCA AGCACGCGCC GATGAGCGTC GGCGAATACA AGGCCAAGCA CGCGCCGGGC TGCGGCTGCT GCTCCGGCCT GAAGAAGCCG GCGCGGTTGC AGACCCGCAC CAAGAGCGGC GCCAAGGGCT TTCCGACGGC GCGGCCGTGG ATGATCAGCC ACTGA
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Protein sequence | MPVYEYMCDA CGPFTDLRPM AEYEAPQPCP VCETSSPRVL LTAPNFSCMP ASQRNAHATN EKSKHAPMSV GEYKAKHAPG CGCCSGLKKP ARLQTRTKSG AKGFPTARPW MISH
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