Gene RPB_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1228 
Symbol 
ID3910163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1406378 
End bp1407397 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content69% 
IMG OID637883122 
Productsignal-transduction protein 
Protein accessionYP_484849 
Protein GI86748353 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGC GGGACGTGAT GACTACCGGG ATCGTAACCG TGCCGCCGGA TGCCCCGGTG 
CGCGCGGTCG CGGAGACCCT GCTGAAATAC GGCATCAGCG CGGTGCCGGT GGTCGACCAC
CACGGCGCGC CGCTCGGCAT CATCAGCGAG GGCGACCTGA TGCCGCGCAA CGAGACCGCC
CGGGAGGCGC GCCGCGACTG GTGGCTGCAG ATCCTGTCCA ACGGCGGCGA GGTGCATCCG
GACTATCTGC AGTTCATGAG GTCCGATCAC CGCACGGCGG CGCAGATCAT GGTATCGCCC
GTCGTCACGG TCGATGAAAA TGTGCCGCTC GCCGAGATCG CCGACATTCT GTTCGAGAAC
AAGATCAAGC GCGTTCCGGT GCTGCGGGAG GGGCGGATCG TCGGCATCGT CAGCCGCGCC
GACCTGCTCA AGACCCTCGC CCGCCCCCGC CCCGCCGCCG CGCGCGATCC GGTCCACGAC
GACGGCACCG CGCTTCCGAT CGCCTCCGAC AAGCTCGAAG CGCTGGCCCA TCGCCACAAC
GGCGCGGCGG CGCCGCCGCA CGAACCCGCC GCCGATGAAT TCTCGGCGTC GGCGTTTCAG
GCGCTGCGCC TCGAACACGA GAAGCATGAA GAGCAACTGC GCCGCGAGGC GAAACGCATC
GCCGACGAAA AGCATCACCG CCAGGCCGGG CAGATGCTGG CGTCGCATCT CACCGACGAG
GCGTGGGAGC GCATGATGCA CAACGCCCGC GCCACCGCCA AGAAGGGCGA CGAGGAACAT
CTGCTGCTGC GCTTTCCGGC GGAGCTGTGC AGCGATCACG GCCGTGCCGT CAACGCGCCC
GACCCGGAAT GGCCGGCGAC GCTGCGCGGC ATGGCCGCCG ACATCTATCT GCGCTGGAAG
GCGGAGCTGC GGCCGCACGG CTTCACGCTG GCCGCCCGCG TGGTGGATTT CCCCGACGGT
ATTCCCGGCG ATATCGGCCT GTATCTGAGC TGGGGCAAGC ACGACGACGT CGCGCACTGA
 
Protein sequence
MKARDVMTTG IVTVPPDAPV RAVAETLLKY GISAVPVVDH HGAPLGIISE GDLMPRNETA 
REARRDWWLQ ILSNGGEVHP DYLQFMRSDH RTAAQIMVSP VVTVDENVPL AEIADILFEN
KIKRVPVLRE GRIVGIVSRA DLLKTLARPR PAAARDPVHD DGTALPIASD KLEALAHRHN
GAAAPPHEPA ADEFSASAFQ ALRLEHEKHE EQLRREAKRI ADEKHHRQAG QMLASHLTDE
AWERMMHNAR ATAKKGDEEH LLLRFPAELC SDHGRAVNAP DPEWPATLRG MAADIYLRWK
AELRPHGFTL AARVVDFPDG IPGDIGLYLS WGKHDDVAH