| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1227 |
|---|
| Symbol | |
|---|
| ID | 3910162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 1405125 |
|---|
| End bp | 1405793 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637883121 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_484848 |
|---|
| Protein GI | 86748352 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.80625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTATC TCTCCGCGAT CGGACCGCTT CTGATACTCA TGGTGTTCGG CGGCGGCCTC
GTCATAGTGG CATATCTGGC GATCGACGAT ATGCGCACGC GCGGCATGTC CTGGAAGGCC
GGATCATTCT CCGCGACAAT GGCGTCGGTC ACCACCGGAA TGCGGGCAGT GCCGCCCGGA
CCGGCGATCG TCGCCGTGGC CGTCCTTGCC GGCGCCGTCA TCGTATATAT GGCGGCGGGC
AATTTCGGGC CTGCTCCGGG CACGCCGTCG GCCGCGATCT CGGACAGCGC CACGCCGGAC
AGCGCGCCGG CAGCCGAAGC GTCGGCGCCC GCACCGGCTC CCGCTGCAGC GCCGGCCGTC
ACGACGGCAG CCGCAACCCC GCCCGTTGCG AAGCCCGCCC CGGCGGCCCC GAAGGCTTCC
GCCGATCCGG GGACCAATTC GATGGCGAGC ATGTCGGCCA ATGGCGCGGT GCGGATGCTG
ACGTCGTCGA GCTGCGCGTC GAACGGTTGC CCGCTGTCGT GCGAGGCCGA CGAGATCCTC
GCCTCGGCGT ACTGCATCGG CAGCGGCACG GCACGGCTGG CGGACCAGCT TCAGGTCAAG
GACGGCATCG TGACGGCGAA ATGCAGCCCG AGCGCCAGCA GCATCACGCT CGCCTGCGCC
CGCAAGTAA
|
|---|
| Protein sequence | MEYLSAIGPL LILMVFGGGL VIVAYLAIDD MRTRGMSWKA GSFSATMASV TTGMRAVPPG
PAIVAVAVLA GAVIVYMAAG NFGPAPGTPS AAISDSATPD SAPAAEASAP APAPAAAPAV
TTAAATPPVA KPAPAAPKAS ADPGTNSMAS MSANGAVRML TSSSCASNGC PLSCEADEIL
ASAYCIGSGT ARLADQLQVK DGIVTAKCSP SASSITLACA RK
|
|---|
| |