Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1165 |
Symbol | |
ID | 3910100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1335132 |
End bp | 1336760 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637883059 |
Product | putative acyl-CoA synthetase |
Protein accession | YP_484786 |
Protein GI | 86748290 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.431504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.494269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTGGAC TGATGCAAGA CTGGCCTTTG CTGTGTCACC GGATCATCGA GCATGCGGCG CAGGTCCATG GCAACCAGGA GGTGGTCACC CGTTCGGTGG AGGGGCCGAT CGTCCGCACC ACCTATGCGC AGATCCATCG TCGGGCGCTG AAGGTGAGCC AGATGCTGGA CCGCGCCGGC ATCAAGCTCG GCGACCGCGT CGCGACGATC GCCTGGAACA CCGCCCGGCA TCTGGAATGC TGGTACGGCA TCATGGGAAT CGGCGCGATC TGCCATACGG TCAATCCGCG GCTTTTTCCG GACCAGATCG TCTGGATCGT CAATCATGCC CAGGACCGGG TGATGATCAC CGATCTCACC TTTATCCCGA TCCTCGAAAA GATCGCCGAC AAGATGCCGA GCGTGGAGCG CTACATCGTG CTCACCGATG CGGAACACAT GCCGCAGACC ACGCTGAAGA ACGCGGTCGC CTACGAGGAA TGGCTGAAGG AGGCCGACGG CGACTTCGCA TGGAAGAGCT TCGACGAGAA CACCGCGGCG GCGATGTGCT ACACCTCGGG CACCACCGGC GATCCCAAGG GCGTGCTGTA TTCGCACCGC TCCAACGTGC TGCACGCGCT GATGGCCAAC AACGGCGACT CGCTCGGCAC CCGCGCGTCC GACACCATGC TGCCGGTGGT GCCGCTGTTC CACGCCAATT CCTGGGGTAT CGCGTTCTCG GCGCCGTCGA TGGGCACCAA GCTGGTGATG CCCGGCGCCA AGCTCGACGG CGCCTCGGTC TATGAACTGC TGTCGACCGA GAAGGTGACG CACACGGCCG GTGTTCCCAC GGTGTGGCTG ATGCTGCTGC AATACATGGC CAAGGAAAAG CTGACGCTGC CGGATCTGAG GATGGTGGTG TGCGGCGGCT CGGCGATGCC GCGCTCGATG ATCAAGGCGT TCGTCGACAT GGGCTGCGAG GCGCGCCACG CCTGGGGCAT GACCGAGATG AGCCCGATCG GCACGCTGGC GGCGCTGAAG CCGCCCTTCG ACAAGCTCGA AGGCGACGAG CGGCTCGACC GGCTGTCGAC CCAGGGCTAT CCGCCGTTCG GCGTGCAGAT GAAGATCACC GACGATGCCG GCACGGACGT GCCGTGGGAC GGCAAGACCT TCGGCCGGCT CAAAGTGTCG GGCCCGGCGG TCGCGAAAGC GTACTACCGC GTCGACACCG AGATCCTCGA CGATCAGGGC TTCTTCGACA CCGGCGACGT CGCCACCGTC GACGCCGACG CCTATATGCG GATCACCGAC CGCTCCAAGG ACGTGATCAA GTCCGGCGGC GAGTGGATCT CGTCGATCGA CCTGGAGAAT CTCGCGGTCG GCCACCCCAA GGTGGCGGAA GCCGCGGTGA TCGGCGTGTA TCACCCGAAA TGGGACGAGC GGCCGCTCTT GATCTGCCAG CTCAAGCCGG ACGTCACCTG CACCCGCGAC GAGATCCTGC AATACATGGA CGGCAAGATC GCCAAATGGT GGATGCCCGA CGACATCGTG TTCGTCGAAG CGATCCCGCA TACGGCGACC GGCAAGATCC TGAAGACCGC CTTGCGCGAT CAGTTCAAGA CCTACAGCCT GCCGAACGCG GCGGCGTGA
|
Protein sequence | MLGLMQDWPL LCHRIIEHAA QVHGNQEVVT RSVEGPIVRT TYAQIHRRAL KVSQMLDRAG IKLGDRVATI AWNTARHLEC WYGIMGIGAI CHTVNPRLFP DQIVWIVNHA QDRVMITDLT FIPILEKIAD KMPSVERYIV LTDAEHMPQT TLKNAVAYEE WLKEADGDFA WKSFDENTAA AMCYTSGTTG DPKGVLYSHR SNVLHALMAN NGDSLGTRAS DTMLPVVPLF HANSWGIAFS APSMGTKLVM PGAKLDGASV YELLSTEKVT HTAGVPTVWL MLLQYMAKEK LTLPDLRMVV CGGSAMPRSM IKAFVDMGCE ARHAWGMTEM SPIGTLAALK PPFDKLEGDE RLDRLSTQGY PPFGVQMKIT DDAGTDVPWD GKTFGRLKVS GPAVAKAYYR VDTEILDDQG FFDTGDVATV DADAYMRITD RSKDVIKSGG EWISSIDLEN LAVGHPKVAE AAVIGVYHPK WDERPLLICQ LKPDVTCTRD EILQYMDGKI AKWWMPDDIV FVEAIPHTAT GKILKTALRD QFKTYSLPNA AA
|
| |