| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1080 |
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| Symbol | |
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| ID | 3908932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1239310 |
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| End bp | 1240470 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637882973 |
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| Product | radical SAM family protein |
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| Protein accession | YP_484701 |
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| Protein GI | 86748205 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1533] DNA repair photolyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.981176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.301506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGAG CATCCAATGC CCTCAAGCGC CCGCCGGTCA CGGCGCCCTC CGAGCCGGTG
GGCGCAATCT CTCCGTTTCC TGAGATTGAA ATTGCGATCG ACAAGCAGCG GCGGCGCGGC
CGCGGCGCGC AATCCAACGA GTCGGGCCGC TACGAAGCCG AGGCGCGGGT CGCGTTCGAT
GATGGCTGGC AGAGCCTCGA CGAGCTGCCG CCGTTCAAGA CCACGGTCGC GCTCGACACC
GCGCGGAAAG TCATCACCCG CAACGAGTCG CCGGATATCG GCTTCGATCG TTCGATCAAT
CCGTATCGCG GCTGCGAGCA CGGCTGCGTC TATTGCTTCG CGCGGCCGAC CCATGCCTAT
CTCGGCCTGT CGCCGGGGCT GGATTTCGAA TCGCGGCTGT TCGCCAAGCC GGATGCGCCG
GCGCTGCTGG AGAAAGAACT CGCCGCTGCC GACTATCAGC CGCGGATGAT CGCGATCGGT
ACCAATACCG ACCCGTATCA GCCGATCGAG CGCGAGCACA AGATCATGCG GGGCGTTCTC
GAAGTGCTGG AGAAGACCGG CCATCCGGTC GGCATCGTCA CCAAATCGGC GCTGGTCACG
CGTGACATCG ACATTCTGGC GCGGATGGCG AAGCGCCAGC TCGCCAAGGT CGCGCTGTCG
GTGACATCGC TGGATCCGAA ACTGGCGCGC ACCATGGAGC CGCGCGCCTC CGCGCCTGAG
AAGCGGCTGG AAGCGCTGAA GCGGCTCTCC GAGGCCGGGA TTCCGACCAC CGTGATGGTG
GCGCCGGTGA TCCCGGCGCT CAACGATGTG GAGATCGAGC GCATCCTCGA CGCCGCCGCC
CATGCCGGCG TCAAGGAGGC CAGCTACGTG ATGCTGCGGC TGCCGCTGGA AGTGCGCGAC
CTGTTCCGCG AATGGCTGAT GGCGAACTAT CCGGATCGCT ACCGCCACGT CTTCACCCTG
ATCCGCGACA TGCGCGGCGG CCGCGACTAC GATTCGCAAT GGGGCACGCG GATGAAAGGC
ACCGGCCCGA TCGCCTGGAT GATCGGTCGC CGCTTCGAGA CCGCCTGCGC GCGGCTCGGC
CTCAACAAGC GCCGCTCGAA ATTGACGACG GATCATTTCG AAAAGCCGGA GCGGGCGGGG
CAGCAGCTGA GTTTGTTCTA G
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| Protein sequence | MSRASNALKR PPVTAPSEPV GAISPFPEIE IAIDKQRRRG RGAQSNESGR YEAEARVAFD
DGWQSLDELP PFKTTVALDT ARKVITRNES PDIGFDRSIN PYRGCEHGCV YCFARPTHAY
LGLSPGLDFE SRLFAKPDAP ALLEKELAAA DYQPRMIAIG TNTDPYQPIE REHKIMRGVL
EVLEKTGHPV GIVTKSALVT RDIDILARMA KRQLAKVALS VTSLDPKLAR TMEPRASAPE
KRLEALKRLS EAGIPTTVMV APVIPALNDV EIERILDAAA HAGVKEASYV MLRLPLEVRD
LFREWLMANY PDRYRHVFTL IRDMRGGRDY DSQWGTRMKG TGPIAWMIGR RFETACARLG
LNKRRSKLTT DHFEKPERAG QQLSLF
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