| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1066 |
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| Symbol | |
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| ID | 3908918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1221672 |
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| End bp | 1225136 |
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| Gene Length | 3465 bp |
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| Protein Length | 1154 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637882959 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_484687 |
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| Protein GI | 86748191 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA CGCGTCTCCG CCTTCACGGC TTCAAGTCGT TCGTCGAGCC CACCGACTTC
ATGATCGAGC CGGGTCTCAC CGGCGTGGTC GGGCCGAACG GCTGCGGCAA GTCCAATCTG
GTCGAGGCGC TGCGCTGGGC GATGGGCGAG ACCTCGCACA AATCGCTGCG CGCGACCGAC
ATGGACGCGG TGATCTTCGC GGGCTCCGGC AACCGGCCGT CGCGCAACCA CGCCGAAGTG
GTGATGTCGA TCGACAACAC CGACCGCACC GCGCCGGCGG CGCTGAACGA TTCGGAAGTG
CTGGAAATCT CCCGCCGGAT CGAACGCGAG GCCGGCTCGC AATATCGCAT CAACGGCCGC
GAAGTCCGCG CCCGCGACGT GCAGCTGTTG TTCGCCGATG CCGCCACCGG CGCGCGCTCG
CCGGCGCTGG TCCACCAGGG CAAGATCGGC GAAATCATCC AGGCCAAGCC GGAACAGCGC
CGCCGCGTGC TGGAAGACGC CGCCGGCGTC GCCGGCCTGC ACGCCCGCCG CCACGAGGCC
GAACTGCGGC TGAAGGCGGC CGAAACCAAC CTGACCCGCG TCGAGGACGT GATCGGACAA
CTCTCGTCGC AGGTCGACGG GCTGAAGAAG CAGGCGCGGC AGGCGATCCG ATTCAGGGAA
GTCGCCGCCA AGGTGCGCAA GACCGAGGCG ACGCTGTATC ATCTGCGCTG GCGCGACGCC
AACACCGAGG TCACCACCGC CGCCCAGGTG CACGATCTCG GCGTCCGCGA ACTCGCCGAG
CGTACCCGCG AGCAAGCCGA GGCCGCCCGC ATCCAGGCCG ACCGCGCCTC GACGCTGCCC
GGCCTGCGCG AGGCCGAGGC CCGCGCCGCC GCAGGATTGC AGCGGCTGAT CAACGCCCGC
GAATTGCTCG ACCGCGAGGA GGCCCGCGCC AAGGAGCGCG TCGTCGAGCT CGAGCGCCGG
CTGGCGCAGT TCTCCTCCGA CGTCGAGCGC GAGCAGCAAC AGGCGATCGA TGCCGACGCC
GCACTGGAGC GGCTGCAGGC CGAGGACATC GAGCTGCGTG AAGAGATTCT CGAACGCGTC
GAGAAGCGCG GCGGCGTCGA CGAGCGCGTC GGCCTCGCCG AGGAAGCGCT CGGCGAAGCC
GAGCGGCTGT TCGCCGAACT CACCACCCAG CTCGCCCAGC TCACCGCGCG GCGCAACCAG
TTCGAGCAGG CGGTGCGCAG CCATCGCGAC CGGCTCGGCC GGCTCGACAC CGAGATCAGG
AACGTCGACA GCGAAATCGA GCGGCTGACG GCGGAAACCA GCGGCGCCGG CAATGTCGAC
GAACTCGCCG AAGCGGTGGC GATGGCGCAG GAGACGCTGG CCGAACTCGA AGCCTCGGTG
CAGCAGGCCG AGGCTGCGCA GGTCGCCGCC CGGCACAAGC TCGACGGCTC GCGCAGCCCG
CTGGTCGACG CCGAAAAGCG CGTGCAGCGG CTCGAGACCG AAGCCAAGAC GATCAGCAAG
ATCCTCAACG GCGAGACCAA GAATCTGTGG CCGCCGATCA TCGACGGCAT CACCGTCGCC
AAGGGTTACG AGAAGGCGAT CGGCGCCGTG CTGGGCGACG ATCTCGACGC GCCGGTGGAC
CCGACCGCGC CGATGCGCTG GACCGATATC GGCGTGCAGG CCGACGATCC GGCGCTGCCG
GACGGCGTCG AGGCGCTGAG CCAACACGTC AACGCGCCAC CGGAGTTGGC GCGGCGTCTG
GCGCAGATCG GCGTGGTGAC GAAGGAGCGC GGCGGCGAAC TGGTCGGGCA GTTGAAAACC
GGCCAGCGGC TGGTGTCGCT CGACGGCGAC GTCTGGCGCT GGGACGGCTT CGTCGCCTCG
GCCCATGCGC CGACCGGCGC GGCGCGGCGT CTGGCGGAGC GCGCCCGTCT GGTCGATATC
GAGAACGAAC TGGAGCAGGC CCGGATCGAC GCGAGCGCCA AGCGCGACGC GCTGGAAATG
GCCGAAGCCG AACTGCGCAA CGCTGCGCAG GCCGAGTCCG CGTCGCGCGA GTCGCTGCGC
GGCGCCCGCC GCGAGGTCGA TGCCGCGCGC GAGCGCCATG CCGCCGCCGA GCGCGAGATC
AACCGCCACG CCGCGCGCCG CTCGGCGCTG ACCGAAGCGC AGTCGCGCCT CGCCGCCGAC
CGTCTCGAAG CCGAGATGGC CTGCGAGACC GCCGAGAACG CGCTGGCGGA GCTTGCGCCG
AACGACGATT CCGAGCAGCG GCTGTCGGCC GTGCGCGGCG ACATCGAAAA TCATCGGCGC
AACGCCGCGC AGGTCCGCGC CGAGGCGCAG GCGCTGGCGC GCGAGGCCGA GCTCGCCGAC
AAGCGGCTGC AGGCGATCGT CGGCGAGCGC AACCAGTGGA TCCAGCGCAA GCAGAGCGCG
GCGTCGCAGA TCGCGACCGT CGAGGAGCGC GTCGCCGAAC TGATCGCCGA GCGCGCCGAG
CTCGACAATG CGCCGACGGT GTTCGCCGAG AAGCGCAGCG CGATCATCAC CGAGATCGAA
TACGCCGAGG CCGACCGCCG CACCGCCGCC GACGCGCTCG CCACCGCCGA ACAGGCGATG
GCCGACACCG ACCGCGCCGC GAAAGCGACG CTCGAACAGC TCTCCCGCGC CCGCGAAGCC
TGCGCCCGCG CCGAGGAGCG GATGGAAGCG GCGCGCCGCC GGCTCGAGGA CATCGAGCGC
GAGATCCGCG ACATGCTCGA AGTCGAGCCG CAGGCCGCCG CCTCGCTCGC CGAGATCGTC
GAGGGCACCG AACTGCCGCC GCTCGCCGAG ATCGAAGCCG ATCTGGAGAA GCTGCGCCGC
GACCGCGAAC GGCTCGGCGC AGTCAATCTG CGCGCCGAGG AAGAGCTCAA CGAGGTCGAA
ACCCAGCACG GCTCGCTCGC CGCCGAGCGC GACGATCTGG TCGAGGCGAT CAAGAAGCTG
CGCACCGGCA TCCAGAGCCT CAACAAGGAA GCGCGCGAGC GCCTCCTGGC GTCGTTCGAA
GTCGTCAACG GCCACTTCAA GCGGCTGTTC ACCACGCTGT TCGGCGGCGG CGAGGCCGAA
TTGAAACTGA TCGAGAGCGA CGACCCGCTG GAAGCCGGCC TCGAAATCAT CGCCAAGCCG
CCGGGGAAGA AGCCGCAATC GCTGTCGCTA TTGTCCGGCG GCGAGCAGGC GCTGACCGCG
ATGGCGCTGA TCTTCGCGGT GTTCCTCACC AACCCGTCGC CGATCTGCGT GCTGGACGAA
GTCGACGCGC CGCTCGACGA CCACAACGTC GAACGGTTCT GCGACCTGTT GAACGAGATG
ACCGCGACCA CCGAGACGCG GTTCATCATT ATCACCCACA ACCCGATCAC CATGGCGCGG
ATGAACCGGC TGTTCGGCGT CACCATGGCG GAGCGCGGCG TCTCGCAGCT GGTCTCGGTC
GACCTGCAAG GCGCGGTGGA TATTCTGGAT CAGAACGTGG CGTGA
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| Protein sequence | MKLTRLRLHG FKSFVEPTDF MIEPGLTGVV GPNGCGKSNL VEALRWAMGE TSHKSLRATD
MDAVIFAGSG NRPSRNHAEV VMSIDNTDRT APAALNDSEV LEISRRIERE AGSQYRINGR
EVRARDVQLL FADAATGARS PALVHQGKIG EIIQAKPEQR RRVLEDAAGV AGLHARRHEA
ELRLKAAETN LTRVEDVIGQ LSSQVDGLKK QARQAIRFRE VAAKVRKTEA TLYHLRWRDA
NTEVTTAAQV HDLGVRELAE RTREQAEAAR IQADRASTLP GLREAEARAA AGLQRLINAR
ELLDREEARA KERVVELERR LAQFSSDVER EQQQAIDADA ALERLQAEDI ELREEILERV
EKRGGVDERV GLAEEALGEA ERLFAELTTQ LAQLTARRNQ FEQAVRSHRD RLGRLDTEIR
NVDSEIERLT AETSGAGNVD ELAEAVAMAQ ETLAELEASV QQAEAAQVAA RHKLDGSRSP
LVDAEKRVQR LETEAKTISK ILNGETKNLW PPIIDGITVA KGYEKAIGAV LGDDLDAPVD
PTAPMRWTDI GVQADDPALP DGVEALSQHV NAPPELARRL AQIGVVTKER GGELVGQLKT
GQRLVSLDGD VWRWDGFVAS AHAPTGAARR LAERARLVDI ENELEQARID ASAKRDALEM
AEAELRNAAQ AESASRESLR GARREVDAAR ERHAAAEREI NRHAARRSAL TEAQSRLAAD
RLEAEMACET AENALAELAP NDDSEQRLSA VRGDIENHRR NAAQVRAEAQ ALAREAELAD
KRLQAIVGER NQWIQRKQSA ASQIATVEER VAELIAERAE LDNAPTVFAE KRSAIITEIE
YAEADRRTAA DALATAEQAM ADTDRAAKAT LEQLSRAREA CARAEERMEA ARRRLEDIER
EIRDMLEVEP QAAASLAEIV EGTELPPLAE IEADLEKLRR DRERLGAVNL RAEEELNEVE
TQHGSLAAER DDLVEAIKKL RTGIQSLNKE ARERLLASFE VVNGHFKRLF TTLFGGGEAE
LKLIESDDPL EAGLEIIAKP PGKKPQSLSL LSGGEQALTA MALIFAVFLT NPSPICVLDE
VDAPLDDHNV ERFCDLLNEM TATTETRFII ITHNPITMAR MNRLFGVTMA ERGVSQLVSV
DLQGAVDILD QNVA
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