| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1057 |
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| Symbol | |
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| ID | 3908909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1212175 |
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| End bp | 1213812 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637882950 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_484678 |
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| Protein GI | 86748182 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCT GGGGAGATTC CGGCATCGGC GGAGCGCTGC GCCGCGAGAC CCATTATGGC
GACCGGACGA TGCTGTGCTT CGCCGAGCGC CCGCCGACGC TGGCGGCGAT GTTCGACGAT
CTGGTGACGA AATTCGGCGA CCGGCCGGCG ATCGTCGACG AGGACGTCAC GCTGAGCTAT
CGCGACCTCG ACGGACGCGT GCGCAGCATC GCCGCGTCGC TGATCGGCCT CGGCGTCGCG
CCGGGCGATC GGGTCGCGCT GTTTCTCGGC AATTGCTGGG AATTCGTCGC CTGCGCGCTG
GCCTGCAACC GGATCGGCGC GCGGCTGGTG CCGATCGGCA CGCGGCAGCG CAAGGCCGAG
CTGGACTTCC TGCTGACCAA CAGCGGCGCC AAGGTGCTGG TGTTCGAGGC CGACCTCGCC
GATCAGATTC CGGCGCAGGC CGACGTCCCG ACGCTGACGC ATCGCTTCGC CGCGCATGGC
GACGCCGCCG GCGCGCGGCC GTTTGCCGAT CTGCTGGCGG CGTCGCCGGC CGATGCGCCG
GTCGTGGCGA TGCACGAGGA CGACACCGCG GTGATCCTCT ACACCTCCGG CACCACCGGC
AAGCCCAAGG GCGCCGAGCT GACGCATCTC AGCATCCTGC ATTCGGCCTA CGCCTTCGCG
CGCGCGCATG AACTGACCGA GCACGATCGC GGCCTGGTCG CCGTGCCGCT GTCGCATGTC
ACCGGCCTGG TCGGCGTCAC CTATGCCACG CTCGCCGCCG GCGGCTGCGT CGTGCTGATG
CGGCAGTCCT ACAAGACACC CGACTTTCTG GCGCTGGCGA GCCGCGAGAA AATCACCTGG
TCGATTCTGG TGCCGGCGAT CTACACGCTG GTGGCGATGG CGCCGGAGTT CGACAGGCAC
GATTTGTCGG CGTGGCGGAT CGGCTGCTTC GGCGGTGCGC CGATGCCGGT GCCGACCATC
GAGATGCTGA GCAAGCGGCT GCCGAATCTA CAATTGCGCA ACGCCTATGG GGCGACCGAG
ACGACCTCGC CGACCACGAT CATGCCGCAG GCCCATTGGC GCGATCACAT GGACAGCGTC
GGACAGCCGA TCCCCTATGC GCAGGTCCGG GTCGTCGATG CCGATGGCAA CGAGGTCGCG
CCCGGCCAGC CGGGCGAATT GCTGATCGCC GGGCCGATGG TGGTGCCGCG CTATTGGCAG
CGCGAGGATG CCAACGCGGC GGAATTCATC GGCGGCTATT GGCGCAGCGG CGATATCGGT
TCGATCGACG CGGAGGGATT TGTGCGGGTG TTCGACCGCA AGAAGGACAT GATCAACCGC
GGCGGCTTCA AGATCTTCTC GGCCGAGGTC GAGAACGTGA TCTGCGGCCT CGACGGCGTG
CTGGAGACCG CGATCGTCGG CACGCCCGAC CCGGTGCTCG GCGAACGCGT CAACGCCATC
GTGGTCACGA GCGAAGGCGC GCAGTTGAGC GAAGGCGATG TCGCCGCCTA CTGCGCGGCG
CGGATGTCGG ACTACAAGGT GCCGGAAAGC ATCATCCTCC GCACCGAGCC ACTGCCGCGC
AACGCCAACG GCAAGATCCA GAAGACGATG CTGCGCGAGA CGATCGCCGA GCGGGCAGCG
CGTCACAGCG CAGCGTAG
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| Protein sequence | MKFWGDSGIG GALRRETHYG DRTMLCFAER PPTLAAMFDD LVTKFGDRPA IVDEDVTLSY
RDLDGRVRSI AASLIGLGVA PGDRVALFLG NCWEFVACAL ACNRIGARLV PIGTRQRKAE
LDFLLTNSGA KVLVFEADLA DQIPAQADVP TLTHRFAAHG DAAGARPFAD LLAASPADAP
VVAMHEDDTA VILYTSGTTG KPKGAELTHL SILHSAYAFA RAHELTEHDR GLVAVPLSHV
TGLVGVTYAT LAAGGCVVLM RQSYKTPDFL ALASREKITW SILVPAIYTL VAMAPEFDRH
DLSAWRIGCF GGAPMPVPTI EMLSKRLPNL QLRNAYGATE TTSPTTIMPQ AHWRDHMDSV
GQPIPYAQVR VVDADGNEVA PGQPGELLIA GPMVVPRYWQ REDANAAEFI GGYWRSGDIG
SIDAEGFVRV FDRKKDMINR GGFKIFSAEV ENVICGLDGV LETAIVGTPD PVLGERVNAI
VVTSEGAQLS EGDVAAYCAA RMSDYKVPES IILRTEPLPR NANGKIQKTM LRETIAERAA
RHSAA
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