Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1020 |
Symbol | |
ID | 3909144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1169376 |
End bp | 1170683 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637882913 |
Product | hypothetical protein |
Protein accession | YP_484641 |
Protein GI | 86748145 |
COG category | [S] Function unknown |
COG ID | [COG4325] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCAC GTCTCCGCAA ACTCTACGAC GATCTGTCCG ACACGTTCTG GCTGGTTCCG GCGCTGCTGG TGCTGCTCGG CACGGTCGCG GCGTTCGGCA TGATCGAGAT CGATCGCAGC GGCACGGTGC CGGCCTGGCT GCTGGAGAAC TGGCTCTACA ACGGCGGCGC CACCGGCGCC CGCACGCTGC TCGGCGCGGT GGCGTCGTCG ACCATCGGCG TCGCCGGCAC GGTGTTCTCG ATCACCATCG CGGCGCTGTC GCTGGCCGCG GGGCAGATGG GGCCGCGGCT GCTGCGCAAC TTCACCCGCG ACCGCGGCAA CCAGATCACG CTCGGCATCT TCCTCGGCAC GTTCTGCTAC GCGCTGATCG TGCTGCGCAG CGTCCGCACC GCCGACGAGG GCGCCTTCGT GCCGCATCTC GCGCTCGGCG TCGGCATCGC GCTGGGCTTC ATCTGCGTCG CCACGCTGGT GTATTTCGTC GATCACATGG CGAGCCGGAT CAATGTCGAC ACCGTGATCG GGCTGGTCAG CGACGACGTC CGCCGCGTGA TGCGCGGACT GACCGACGAC GCCCCGCAGC CGGAGCCGCC GCCGCCGGCG CATTGGCGCG ACGCCGAGCC GATCCGCGAC GCGCGCGCCG GCTATCTGCA TCATCTCGAC GAGAACGGGT TGGCGAGTTG GGCGTGCGAG CACGAGACGG AAATCCGGCT GCTGGTCCGC CCCGGCGACT ACGTCTTTCC CGGCGCGCCG ATCGCGCTGA TCAAGCCGCC GCGCGACGGC GCGGAAGAGG CCGTCCGCGA CGCGACGGCG CTCAGCCCGA CGCTGACCTC GTCGGACGAT CTGCGCTTCG CGATCCGGCA ATTGGTCGAG GTCGCGGTGC GGGCGCTGTC GCCGGGCATC AACGACCCGC ACACCGCGCT CAGCGTGCTC AACCGGCTCG GCGCCGCGCT GTGCGACATG CAGCCGGTGC GCATGAAGAG CGGCGTCGTG GTCAAACAGG GCCGCCTCGC GCTGGTGGTG CCGCATCTGC AATACGACGA GCTGGTCGAC GCGATGTTGC ACATGATCCG GCAGAACGCC GCCGGCAAGC CCGCGGTGCT GATCGGAATG CTCGAGGTGC TGACGCAGGT GGCGAGCGTC GAGCGCGATC CGCCGCGGCT CTCCAGCGTG CGTCGGCACG CCGACCTGGT GATGGGTGAC GCCGAGCGCG ACGTCCGCGG GCCGGACGAT CTGGCCGACG TGCGCGCGCG GTATTGGGCG TTCGTCGACA TGGCCGAACA CGGCCCGCTC GGCCCGTTCA AGCTGTAG
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Protein sequence | MNARLRKLYD DLSDTFWLVP ALLVLLGTVA AFGMIEIDRS GTVPAWLLEN WLYNGGATGA RTLLGAVASS TIGVAGTVFS ITIAALSLAA GQMGPRLLRN FTRDRGNQIT LGIFLGTFCY ALIVLRSVRT ADEGAFVPHL ALGVGIALGF ICVATLVYFV DHMASRINVD TVIGLVSDDV RRVMRGLTDD APQPEPPPPA HWRDAEPIRD ARAGYLHHLD ENGLASWACE HETEIRLLVR PGDYVFPGAP IALIKPPRDG AEEAVRDATA LSPTLTSSDD LRFAIRQLVE VAVRALSPGI NDPHTALSVL NRLGAALCDM QPVRMKSGVV VKQGRLALVV PHLQYDELVD AMLHMIRQNA AGKPAVLIGM LEVLTQVASV ERDPPRLSSV RRHADLVMGD AERDVRGPDD LADVRARYWA FVDMAEHGPL GPFKL
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