Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0933 |
Symbol | |
ID | 3909787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1079647 |
End bp | 1080432 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637882826 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_484554 |
Protein GI | 86748058 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGTTCG CCGTCTCGAA AACCACCGCC GCGAGAGTCC GTCGCGCCAG CGAACTGGCG GTCGGCCCGA TCCTGTTGTT CGGGGTTTGG TGGCTCGCGG CGCGCGGCGG CTGGGTCAAC CGGGATCTTC TGCCGTCGCC GGTCGATACA CTTCGCGACA CCGCGGCCAA TATCTGGTCC GGCAGCATGA CCGAGGATTT CTGGAGCACG CTGGTCCGCG TTGGCTACTC GATCGCGATT GCGATCATCG CGGGCGTTCC GATCGGCATC GTGCTCGGCG CCAAGGCGAC GGTTTATCGT TCGGTCGAGT TCATCATCGA CTTCTTCCGC TCGACGCCGG CGACCGCGAT GTTTCCGCTA TTCCTGCTGC TGTTCGGGCT CGGTGACCTC GCCAAGGTCG CCGTCGCTGC GTTCGCTGCG TGGCTGGTGA TCGTGTTCAA CGTCGCCTAC GGCGTGATGA ACGCCCGGCA GACCCGGATC CTCGCGGCAC GCTCGATGGG CGCATCGTCG CTCCGTATCT TCCGCGACGT GATCTTCTTC GAAACCCTGC CGCAGACCTT TATCGGCCTG CGCACGGCGG TGTCGCTGGC GTTGGTCGTC ATCATCGTCG CCGAGATGTT CATCGGCGCC ACCGACGGCA TGGGCCATCG CATCATCGAT GCGCAGATCT CCTACTCGCT CACCGACATG TACGGCTCGA TCCTGATCGC GGGCGCGATG GGATACGGGC TCAATCTGAT CCTGCTGTTT CTCGAACGTT CGGTCATCCA CTGGTCGGGC AAATGA
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Protein sequence | MPFAVSKTTA ARVRRASELA VGPILLFGVW WLAARGGWVN RDLLPSPVDT LRDTAANIWS GSMTEDFWST LVRVGYSIAI AIIAGVPIGI VLGAKATVYR SVEFIIDFFR STPATAMFPL FLLLFGLGDL AKVAVAAFAA WLVIVFNVAY GVMNARQTRI LAARSMGASS LRIFRDVIFF ETLPQTFIGL RTAVSLALVV IIVAEMFIGA TDGMGHRIID AQISYSLTDM YGSILIAGAM GYGLNLILLF LERSVIHWSG K
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