Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0916 |
Symbol | |
ID | 3909769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1057231 |
End bp | 1058037 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882809 |
Product | trehalose-6-phosphatase |
Protein accession | YP_484538 |
Protein GI | 86748042 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1877] Trehalose-6-phosphatase |
TIGRFAM ID | [TIGR00685] trehalose-phosphatase [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.184398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.382992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCGA ATCTCGCCGA CGACGCCTCG CGGCCGACTA CCAATTCCGT ACCGGTGCCG AGCGCGCTGG TGCCGCATCT CGATCAGTGC GCGCTGCTGC TCGATATCGA CGGCACGCTG CTCGACCTCG CGCCGACGCC GCGCGAAGTC TGGGTGCCGC CGGAACTCGA ACAGACGCTG CGCGCGCTGC ACGAGCGCAC CTCCGGCGCG CTGGCGCTGG TCAGCGGCCG TTCGATCAAC GATATCGATC TGATCTTCGC GCCGCTGAAA CTGCCCGCCG TCGGCGGCCA CGGCGCCGAG ATGCGGCTGT TGTCCAGCGC CGAACAGGTC GCGACCCGCG CGCCGCCGCT GGACCCCGAC TTGAAAAATC GTCTCGCCGC GATCGCGCGG ATCAGTCCCG GCATTCTGCT CGAAGACAAA GGCTACTCGC TGGCGCTGCA CTACCGTCTG GCGCCGCACA CCGAGAAAGC GATCTACGAA TCCGTCGCCG CGATCCGCGC CGAGAATCCG CACGCGCCGC TCGAAGTGCT GCCGGGCAAG TCGGTGTGCG AGATCAAGCA TGCCGGCGTC ACCAAGGCGA CCGGCGTGCT CGAACTGATG AATCACGAAC CGTTCAAAGG TCGGCGCCCG GTGTTCCTGG GCGACGACGT CACCGACGAG ACGGTGTTCG CGATCATGCC GGAACTACGC GGTCTGGCAT TTTCGGTGGG CCGCCACAGC GACATCGTCG CGGGACATTT CGACGAGCCG CGCGATGTGC GGGCCTGGCT GGCGCGGTTG CTCGATCCAC AGTTAGCCCC AGGTTAG
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Protein sequence | MTSNLADDAS RPTTNSVPVP SALVPHLDQC ALLLDIDGTL LDLAPTPREV WVPPELEQTL RALHERTSGA LALVSGRSIN DIDLIFAPLK LPAVGGHGAE MRLLSSAEQV ATRAPPLDPD LKNRLAAIAR ISPGILLEDK GYSLALHYRL APHTEKAIYE SVAAIRAENP HAPLEVLPGK SVCEIKHAGV TKATGVLELM NHEPFKGRRP VFLGDDVTDE TVFAIMPELR GLAFSVGRHS DIVAGHFDEP RDVRAWLARL LDPQLAPG
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