171 homologs were found in PanDaTox collection
for query gene RPB_0916 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_0916  trehalose-6-phosphatase  100 
 
 
268 aa  536  1e-151  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.184398  normal  0.382992 
 
 
-
 
NC_007958  RPD_1027  HAD family hydrolase  91.73 
 
 
269 aa  495  1e-139  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.794711  normal 
 
 
-
 
NC_011004  Rpal_5142  HAD-superfamily hydrolase, subfamily IIB  82.51 
 
 
265 aa  441  1e-123  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4524  HAD family hydrolase  79.1 
 
 
278 aa  392  1e-108  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.278417 
 
 
-
 
NC_009485  BBta_0577  trehalose-phosphatase (trehalose 6-phosphate phosphatase) (TPP)  73.77 
 
 
277 aa  360  1e-98  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_3613  HAD family hydrolase  65.04 
 
 
269 aa  342  4e-93  Nitrobacter hamburgensis X14  Bacteria  normal  0.574242  n/a   
 
 
-
 
NC_007406  Nwi_3026  trehalose-phosphatase  69.58 
 
 
269 aa  330  2e-89  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0414  trehalose-phosphatase  45.49 
 
 
265 aa  170  3e-41  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0987  trehalose-phosphatase  42.92 
 
 
258 aa  166  5e-40  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0355  HAD family hydrolase  44.59 
 
 
272 aa  163  3e-39  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2473  trehalose-6-phosphate phosphatase  37.61 
 
 
268 aa  158  1e-37  Enterobacter sp. 638  Bacteria  normal  0.020525  normal 
 
 
-
 
NC_009720  Xaut_1722  HAD family hydrolase  40.16 
 
 
275 aa  157  2e-37  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.283402 
 
 
-
 
NC_007948  Bpro_3915  HAD family hydrolase  42.36 
 
 
260 aa  153  2.9999999999999998e-36  Polaromonas sp. JS666  Bacteria  normal  normal  0.240157 
 
 
-
 
NC_010717  PXO_04867  trehalose-phosphatase  41.84 
 
 
240 aa  150  2e-35  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0565  trehalose-phosphatase  41.74 
 
 
250 aa  149  3e-35  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2755  trehalose-phosphatase  41.74 
 
 
250 aa  149  4e-35  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2815  trehalose-phosphatase  41.74 
 
 
269 aa  149  4e-35  Burkholderia pseudomallei 1106a  Bacteria  normal  0.622128  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2443  trehalose-phosphatase  41.74 
 
 
269 aa  149  5e-35  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1468  HAD family hydrolase  41.23 
 
 
245 aa  149  5e-35  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.960861 
 
 
-
 
NC_010581  Bind_1976  HAD family hydrolase  40.87 
 
 
261 aa  148  9e-35  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.7461 
 
 
-
 
NC_007651  BTH_I1752  trehalose-phosphatase  40.25 
 
 
269 aa  148  1.0000000000000001e-34  Burkholderia thailandensis E264  Bacteria  normal  0.502389  n/a   
 
 
-
 
NC_008825  Mpe_A3792  trehalose-phosphatase  42.98 
 
 
254 aa  148  1.0000000000000001e-34  Methylibium petroleiphilum PM1  Bacteria  normal  0.299059  hitchhiker  0.000919174 
 
 
-
 
NC_011666  Msil_0200  HAD-superfamily hydrolase, subfamily IIB  40.77 
 
 
257 aa  147  1.0000000000000001e-34  Methylocella silvestris BL2  Bacteria  n/a    normal  0.673335 
 
 
-
 
NC_007434  BURPS1710b_2873  trehalose-phosphatase  41.32 
 
 
269 aa  147  2.0000000000000003e-34  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2838  trehalose-phosphatase  41.32 
 
 
269 aa  147  2.0000000000000003e-34  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_012854  Rleg_6319  HAD-superfamily hydrolase, subfamily IIB  41.71 
 
 
252 aa  147  2.0000000000000003e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.777067  normal 
 
 
-
 
NC_009080  BMA10247_1766  trehalose-phosphatase  41.32 
 
 
269 aa  147  2.0000000000000003e-34  Burkholderia mallei NCTC 10247  Bacteria  normal  0.869594  n/a   
 
 
-
 
NC_011353  ECH74115_2634  trehalose-6-phosphate phosphatase  36.68 
 
 
266 aa  145  5e-34  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.130078  hitchhiker  0.0000000000001334 
 
 
-
 
NC_010622  Bphy_0858  HAD family hydrolase  38.68 
 
 
249 aa  145  5e-34  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A2084  trehalose-6-phosphate phosphatase  36.32 
 
 
267 aa  145  5e-34  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  decreased coverage  0.00000038729 
 
 
-
 
NC_010084  Bmul_2148  HAD family hydrolase  39.51 
 
 
250 aa  145  5e-34  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.524754  normal  0.803634 
 
 
-
 
CP001509  ECD_01866  trehalose-6-phosphate phosphatase, biosynthetic  36.68 
 
 
266 aa  145  7.0000000000000006e-34  Escherichia coli BL21(DE3)  Bacteria  normal  0.298594  n/a   
 
 
-
 
CP001637  EcDH1_1745  HAD-superfamily hydrolase, subfamily IIB  36.68 
 
 
266 aa  145  7.0000000000000006e-34  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01855  hypothetical protein  36.68 
 
 
266 aa  145  7.0000000000000006e-34  Escherichia coli BL21  Bacteria  normal  0.361585  n/a   
 
 
-
 
NC_010498  EcSMS35_1288  trehalose-6-phosphate phosphatase  36.68 
 
 
266 aa  145  7.0000000000000006e-34  Escherichia coli SMS-3-5  Bacteria  normal  0.0241592  hitchhiker  0.000000179042 
 
 
-
 
NC_009800  EcHS_A1994  trehalose-6-phosphate phosphatase  36.68 
 
 
266 aa  145  7.0000000000000006e-34  Escherichia coli HS  Bacteria  hitchhiker  0.000553553  n/a   
 
 
-
 
NC_009801  EcE24377A_2129  trehalose-6-phosphate phosphatase  36.68 
 
 
266 aa  145  7.0000000000000006e-34  Escherichia coli E24377A  Bacteria  hitchhiker  0.000674264  n/a   
 
 
-
 
NC_010468  EcolC_1737  trehalose-6-phosphate phosphatase  36.68 
 
 
266 aa  145  7.0000000000000006e-34  Escherichia coli ATCC 8739  Bacteria  normal  0.758934  normal 
 
 
-
 
NC_011149  SeAg_B1192  trehalose-6-phosphate phosphatase  37.24 
 
 
267 aa  145  8.000000000000001e-34  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0385868  n/a   
 
 
-
 
NC_011368  Rleg2_4595  HAD-superfamily hydrolase, subfamily IIB  41.71 
 
 
252 aa  144  1e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4341  trehalose-phosphatase  36.53 
 
 
266 aa  144  2e-33  Ralstonia pickettii 12D  Bacteria  normal  0.793303  normal  0.173439 
 
 
-
 
NC_008390  Bamb_1035  HAD family hydrolase  39.51 
 
 
250 aa  144  2e-33  Burkholderia ambifaria AMMD  Bacteria  normal  0.28485  n/a   
 
 
-
 
NC_010551  BamMC406_1039  HAD family hydrolase  39.51 
 
 
250 aa  144  2e-33  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.234705 
 
 
-
 
NC_011205  SeD_A1315  trehalose-6-phosphate phosphatase  35.9 
 
 
267 aa  144  2e-33  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  6.89318e-19 
 
 
-
 
NC_011080  SNSL254_A2090  trehalose-6-phosphate phosphatase  35.9 
 
 
267 aa  144  2e-33  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.591439  hitchhiker  4.88107e-23 
 
 
-
 
NC_010678  Rpic_4231  HAD-superfamily hydrolase, subfamily IIB  36.53 
 
 
266 aa  144  2e-33  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0519  trehalose-phosphatase  40.09 
 
 
243 aa  143  3e-33  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0503  HAD family hydrolase  40.09 
 
 
243 aa  143  3e-33  Acidovorax sp. JS42  Bacteria  normal  0.874755  normal  0.0247471 
 
 
-
 
NC_008254  Meso_1529  HAD family hydrolase  40 
 
 
258 aa  142  5e-33  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2145  trehalose-6-phosphate phosphatase  35.47 
 
 
267 aa  142  5e-33  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.55592e-22 
 
 
-
 
NC_008781  Pnap_0526  HAD family hydrolase  41.59 
 
 
259 aa  139  3e-32  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.301013 
 
 
-
 
NC_009428  Rsph17025_2945  HAD family hydrolase  39.57 
 
 
260 aa  139  3e-32  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.18018 
 
 
-
 
NC_007951  Bxe_A1241  trehalose-phosphatase  37.86 
 
 
269 aa  139  4.999999999999999e-32  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.660532 
 
 
-
 
NC_008060  Bcen_0678  HAD family hydrolase  41.36 
 
 
250 aa  138  8.999999999999999e-32  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1157  HAD family hydrolase  41.36 
 
 
250 aa  138  8.999999999999999e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5910  HAD family hydrolase  42.08 
 
 
265 aa  138  8.999999999999999e-32  Sinorhizobium medicae WSM419  Bacteria  normal  0.754111  normal  0.241767 
 
 
-
 
NC_010658  SbBS512_E1022  trehalose-6-phosphate phosphatase  38.28 
 
 
265 aa  138  1e-31  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0949  putative trehalose-6-phosphate phosphatase  41.55 
 
 
260 aa  137  1e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1133  HAD family hydrolase  39.73 
 
 
250 aa  137  1e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.697962  normal 
 
 
-
 
NC_010002  Daci_5869  HAD family hydrolase  39.36 
 
 
272 aa  138  1e-31  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.967435 
 
 
-
 
NC_012560  Avin_42400  trehalose-phosphatase  38.68 
 
 
253 aa  137  2e-31  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2609  HAD family hydrolase  41.55 
 
 
260 aa  136  4e-31  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_1107  HAD-superfamily hydrolase, subfamily IIB  36.86 
 
 
252 aa  135  5e-31  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.173733  normal  0.0523288 
 
 
-
 
NC_011894  Mnod_0220  HAD-superfamily hydrolase, subfamily IIB  37.1 
 
 
250 aa  135  6.0000000000000005e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.740885  n/a   
 
 
-
 
NC_010681  Bphyt_2881  HAD-superfamily hydrolase, subfamily IIB  37.7 
 
 
249 aa  135  7.000000000000001e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.941751  normal  0.303485 
 
 
-
 
NC_007510  Bcep18194_A4269  HAD family hydrolase  41.1 
 
 
250 aa  134  9.999999999999999e-31  Burkholderia sp. 383  Bacteria  normal  0.582596  normal 
 
 
-
 
NC_011071  Smal_3153  HAD-superfamily hydrolase, subfamily IIB  37.24 
 
 
252 aa  134  9.999999999999999e-31  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0371  Trehalose-6-phosphatase protein  39.58 
 
 
266 aa  133  3e-30  Agrobacterium vitis S4  Bacteria  normal  0.501795  n/a   
 
 
-
 
NC_008752  Aave_4210  HAD family hydrolase  37.97 
 
 
245 aa  133  3.9999999999999996e-30  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.418439 
 
 
-
 
NC_011757  Mchl_4863  HAD-superfamily hydrolase, subfamily IIB  36.8 
 
 
251 aa  131  1.0000000000000001e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0256801 
 
 
-
 
NC_010505  Mrad2831_5493  HAD family hydrolase  39.66 
 
 
247 aa  129  4.0000000000000003e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4400  HAD family hydrolase  36.36 
 
 
251 aa  129  5.0000000000000004e-29  Methylobacterium extorquens PA1  Bacteria  normal  0.43196  normal 
 
 
-
 
NC_010725  Mpop_4909  HAD-superfamily hydrolase, subfamily IIB  38.36 
 
 
251 aa  128  8.000000000000001e-29  Methylobacterium populi BJ001  Bacteria  normal  0.379995  normal  0.389107 
 
 
-
 
NC_003296  RSp1104  trehalose-phosphatase protein  36.67 
 
 
262 aa  128  1.0000000000000001e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  0.387228  normal  0.386003 
 
 
-
 
NC_008340  Mlg_0005  HAD family hydrolase  37.98 
 
 
257 aa  127  1.0000000000000001e-28  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.769052 
 
 
-
 
NC_009667  Oant_2714  HAD family hydrolase  35.91 
 
 
260 aa  123  4e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1019  HAD family hydrolase  39.18 
 
 
254 aa  122  5e-27  Maricaulis maris MCS10  Bacteria  normal  0.07517  normal  0.48063 
 
 
-
 
NC_007963  Csal_0236  HAD family hydrolase  36.52 
 
 
248 aa  116  3e-25  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0866  HAD family hydrolase  39.08 
 
 
236 aa  112  5e-24  Acidiphilium cryptum JF-5  Bacteria  normal  0.565084  n/a   
 
 
-
 
NC_009719  Plav_0306  HAD family hydrolase  38.86 
 
 
253 aa  112  7.000000000000001e-24  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3162  HAD family hydrolase  39.22 
 
 
250 aa  112  9e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.248638 
 
 
-
 
NC_009511  Swit_3608  HAD family hydrolase  35.47 
 
 
251 aa  111  1.0000000000000001e-23  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.103192 
 
 
-
 
NC_007802  Jann_2062  HAD family hydrolase  34.73 
 
 
245 aa  110  2.0000000000000002e-23  Jannaschia sp. CCS1  Bacteria  normal  0.20898  normal  0.837706 
 
 
-
 
NC_007794  Saro_1503  HAD family hydrolase  33.47 
 
 
236 aa  108  8.000000000000001e-23  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2717  trehalose-phosphatase  36.48 
 
 
229 aa  108  1e-22  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0981  trehalose-phosphatase  35 
 
 
238 aa  101  1e-20  Rhodothermus marinus DSM 4252  Bacteria  normal  0.977565  n/a   
 
 
-
 
NC_013385  Adeg_0650  trehalose-phosphatase  31.71 
 
 
249 aa  94.7  1e-18  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1368  trehalose-phosphatase  35.86 
 
 
253 aa  92.8  5e-18  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0060  HAD family hydrolase  34.06 
 
 
238 aa  89.7  4e-17  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1771  HAD family hydrolase  34.45 
 
 
262 aa  87.8  2e-16  Caulobacter sp. K31  Bacteria  normal  normal  0.165933 
 
 
-
 
NC_007969  Pcryo_1803  HAD family hydrolase  28.63 
 
 
293 aa  85.5  9e-16  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.0790667 
 
 
-
 
NC_010814  Glov_1808  HAD-superfamily hydrolase, subfamily IIB  34.07 
 
 
273 aa  85.1  0.000000000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0450  putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB  31.08 
 
 
723 aa  80.9  0.00000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5206  trehalose-phosphatase  32.1 
 
 
417 aa  80.9  0.00000000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0820475  normal 
 
 
-
 
NC_009565  TBFG_13408  trehalose 6-phosphate phosphatase otsB2  31.07 
 
 
391 aa  80.9  0.00000000000002  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1656  HAD family hydrolase  32.54 
 
 
261 aa  80.9  0.00000000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.475488  n/a   
 
 
-
 
NC_011145  AnaeK_0483  putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB  33.17 
 
 
723 aa  80.1  0.00000000000003  Anaeromyxobacter sp. K  Bacteria  normal  0.967333  n/a   
 
 
-
 
NC_011891  A2cp1_0478  putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB  33.01 
 
 
723 aa  80.1  0.00000000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0393601  n/a   
 
 
-
 
NC_013730  Slin_4792  trehalose-phosphatase  28.21 
 
 
738 aa  77.8  0.0000000000002  Spirosoma linguale DSM 74  Bacteria  normal  0.567634  normal 
 
 
-
 
NC_008782  Ajs_2161  beta-phosphoglucomutase family hydrolase  31.28 
 
 
525 aa  77  0.0000000000003  Acidovorax sp. JS42  Bacteria  normal  normal  0.135077 
 
 
-
 
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