| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0907 |
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| Symbol | |
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| ID | 3909087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1044169 |
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| End bp | 1045515 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637882800 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_484529 |
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| Protein GI | 86748033 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.78575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATATCA ACGCCGCACC GCAGATCATT GGCCACGGTT CGCAGGGCGT CACGCCCGGC
TACATGTCGG GCTTCGGCAA TTCGTTCGAA ACCGAAGCTC TCCCCGGCGC GCTGCCGATC
GGCCGCAACT CGCCGCAGCG CGCGGCTTAC GGCCTCTATG CCGAGCAATT ATCAGGCTCG
CCGTTCACCG CGCCGCGCGG CGCCAATGAG CGAAGCTGGC TGTATCGCAT CCGCCCCTCG
GTGAAGCACT CCGGCCGCTT TACCAAGGCG GACATGGGCC TGTGGCGCTC GGCGCCGTGT
CTCGAATACG ACATGCCGAT CGCGCAGCTG CGCTGGGACG CGCCGTCGAT GCCGCAGGAG
GATCTGACGT TCCTGCAAGG CGTGCGAACG ATGACGACCG CCGGCGATGT GAATACGCAG
GCCGGCATGG CGACGCATAT GTATCTGATC ACCCAATCGA TGGTCGATCA GCATTTCTAC
AATGCCGACG GTGAATTGAT GTTCGTGCCG CAGCAGGGCA GCCTGCGGCT GGTCACGGAA
TTCGGCGTCA TCAGCATCGA GCCCGCCGAA ATCGCGGTGA TCCCGCGCGG CGTCAAGTTT
CGCGTCGAAC TGGTCGACGG CCCGGCGCGC GGCTATTTGT GTGAGAATTA CGGCGGCGCC
TTCACGCTGC CGGAGCGCGG CCCGATCGGC GCCAATTGCC TGGCCAATTC GCGCGATTTC
CTGACGCCGG TGGCGGCCTA TGAGGACAGG GACGTGCCGA CCGAATTGTT CGTGAAATGG
GGCGGGGCGC TGTGGCAGAC CACGCTGCCG CATTCGCCGA TCGATGTGGT CGCGTGGCAT
GGCAACTACG CGCCGTACAA ATACGATCTG CGCACCTTCT CGCCGGTCGG CGCGATCGGC
TTCGATCATC CCGATCCGTC GATCTTCACC GTGCTGACGT CGCCGTCGGA AACCGCCGGC
ACCGCCAATA TAGACTTCGT GATCTTCCCC GAGCGCTGGA TGGTGGCGGA AAACACCTTC
CGGCCGCCCT GGTACCACAT GAATATCATG TCGGAGTTCA TGGGGTTGAT CTGCGGCGTC
TACGACGCCA AGCCGCAGGG CTTCGTCCCC GGCGGCGCGT CGCTGCACAA CATGATGCTG
CCGCACGGGC CGGATCGCGA GGCGTTCGAT CATGCCTCGA ACGGCGAGCT GAAGCCGGTG
AAACTCACCG GCACGATGGC CTTCATGTTC GAGACCCGCT ATCCGCAGCG CGTCACCGAA
TATGCCGCGA CCGCCGGCAC GCTGCAGGAC GACTACGCCG ATTGCTGGCG CGGCCTGGAG
AAGCGCTTCG ACCCGAGCCG GCCATGA
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| Protein sequence | MNINAAPQII GHGSQGVTPG YMSGFGNSFE TEALPGALPI GRNSPQRAAY GLYAEQLSGS
PFTAPRGANE RSWLYRIRPS VKHSGRFTKA DMGLWRSAPC LEYDMPIAQL RWDAPSMPQE
DLTFLQGVRT MTTAGDVNTQ AGMATHMYLI TQSMVDQHFY NADGELMFVP QQGSLRLVTE
FGVISIEPAE IAVIPRGVKF RVELVDGPAR GYLCENYGGA FTLPERGPIG ANCLANSRDF
LTPVAAYEDR DVPTELFVKW GGALWQTTLP HSPIDVVAWH GNYAPYKYDL RTFSPVGAIG
FDHPDPSIFT VLTSPSETAG TANIDFVIFP ERWMVAENTF RPPWYHMNIM SEFMGLICGV
YDAKPQGFVP GGASLHNMML PHGPDREAFD HASNGELKPV KLTGTMAFMF ETRYPQRVTE
YAATAGTLQD DYADCWRGLE KRFDPSRP
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