| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0899 |
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| Symbol | |
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| ID | 3909079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1034573 |
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| End bp | 1036714 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637882792 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_484521 |
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| Protein GI | 86748025 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.935654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGC GTCTTGGTCC GATTGCGACG ACGATTGGCG CAGCCATCCT GGCGATGGCG
GTGTCGTGCG GCGTTGCGCT GGCCGACGCC AAACGTGTCG CGATGGTGGT CGGCAACTCG
CTGTATCAGA GCGTCCCGCA GCTTCCCAAC CCGTCGCGCG ACGCCGACGC CGTCGCGCGG
ATGTTCAAGG ATTCCGGCTT CGACGTCACC CGGGTGATCA ACGCCGGCAA CCTCGATTTC
AAGCGCGCGA TCCGCAAATT CGAGACCGAT GCCGACCAGG CCGACGTCGC CGTGATCTAC
TACGCCGGCC ACGGCATCGA GATCAGCGGA ACCAACTATC TGATCCCGAT CGACGCCCGG
CTGGCCAGCG ACCGCGACGC CGAGGACGAG GCGATACCGC TCGAGCGCCT GGTGTCGTCC
GCCGACGGCG CGCAGAAGCT GCGGGTGGTG ATCCTCGACG CCTGTCGCGA CAACCCGTTC
ACGGTGCGGA TGCGGCGCGA AAGGAAGGTG GCGAGCCGCA ACGTCGTGTC CGGCCTCGGC
AAGGTCGAAC CGACCAGCAC CGATACGCTG ATCGCCTATG CGGCGAAGGC CGGCTCCACC
GCGGAAGACG GGACCGGCGA TCACAGCCCG TTCACGACCG CCATCCTGAA GAACCTCACC
GTGCCCGGGC TCGACATCCG GCTCGCCTTC GGCCGGGTCC GCGACGAGGT GATGAAGGCC
ACCGGCAACA AGCAGGAGCC GTTCGTGTAC GGCTCGCTCG GCGGCGGCAA CGTGTCGCTG
GTGCCGGCGC CGGCAGTGAC GCAGGAGGCG ACCGCCAGCG ACGTCAAGGC CGACTACGAT
CTGGTCGCCA GGATCGGCTC GCGCCGCGCC TGGGAGGTGT TCCTCGCCAC TTACAAGACC
GGCTTCTATG CCGATCTGGC CCGCGCCCAG ATCGCGAGTC TGACCGATCA GGTCCCGAGC
GGCGAGCCCC CGTCGGCGGC AGGCCAGATC ACGACCGCGG CGGTCGATCC CGGCACGCCG
GCGCCGGGGC GCGAAGTGAG TTCCCGGGAG GCGCTGGACT GGGATCGCGT CAAGGACAGC
AACGACATTG CGGCGCTGCA GAAATTCATC AAGCGATATC CGGATTCGCC GCGGTCGATC
GCCGCGCAGA GCCGCGTCGA ATTGCTGCAG CAGATCGCCC GCGAGCGGGA GCAGCGCGCC
CGCGCCGAGC GCGAGGCCGC GGCGCGGGCG GCGGAACTGG CGAAGCTCCA GGCCGCGCAG
AAAAAGGCCG AGGAAGCCGC CACGCGCCAG CGCGAGCAGG ACGAACGCCG CGCCCAGAAA
GCCGAGGCCG AGGCCAAAGC CAAGGCGGAG GACGCCGAGC GCAAGGCGGC CGAAGCCAAG
CGCAAGGCCG ACGAGGCCGA CCGTCAGAAG TCCGCCCAGG AAGCCGCGGC GCTGCGCGCG
GAAAGTGAAA AGCGCGCCAG GCAGGCCGAG GACGAGCGGC GCAAGGCCGC GGAGGCGGCC
ATTCAGGAGA CCGTCTGCAA GGATCAGCAG GCCCAATTCG ACGCGCTCAA CAGCAAGAGC
GACGCGCCCT CGGCGCTCGA CGATATGAAG GTGTTGGCCA AATCGATCAC CTGCAGCCGG
CTGCAGCCGA TGGTCGCCAT GGCGATCGAC CGGCTGAAGC TCGAAGCCGA CAAGCGCGCC
GCCGCGATGC CGAACTCGCC GCAACTCGTT CGCTCCGCGC AGACCGAACT GGCGCGGATC
GGCTGCCTGA CCGACAAGCC GAACGGCGTG CTCGGCGACC CGACCAGGAC GGCGCTGGGG
CGCTATTTGA GCATCAAGGG ACAATCATCG AGCGATCTCA GCGTGACAGA GGCGCTGGTG
GCGGACCTCG GCAAGCAATC GGGCCGGGTG TGCCCGCTGG TGTGCAAAGC GGGCGAGATC
GCCAAGGGCG ATGCTTGTAT CGCGAGCGAG AAGCGCGACG AGCCGAAAGC GGCGGCGCGC
CGCCAGCGCG ACGACGAAGA CGACCGCGCG GCGCGGCGCA AGCCGGCCCG CCGCGAAGCG
CAACAGGAGC GTCGTCAGTC GCGGCCCGAA CCGCGCGCCC GGCAGCAGGC GACGTCGCGG
CCGAGCGGCG GCGCCGCCGC GATGATCGGC GTCGGCTTCT GA
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| Protein sequence | MIERLGPIAT TIGAAILAMA VSCGVALADA KRVAMVVGNS LYQSVPQLPN PSRDADAVAR
MFKDSGFDVT RVINAGNLDF KRAIRKFETD ADQADVAVIY YAGHGIEISG TNYLIPIDAR
LASDRDAEDE AIPLERLVSS ADGAQKLRVV ILDACRDNPF TVRMRRERKV ASRNVVSGLG
KVEPTSTDTL IAYAAKAGST AEDGTGDHSP FTTAILKNLT VPGLDIRLAF GRVRDEVMKA
TGNKQEPFVY GSLGGGNVSL VPAPAVTQEA TASDVKADYD LVARIGSRRA WEVFLATYKT
GFYADLARAQ IASLTDQVPS GEPPSAAGQI TTAAVDPGTP APGREVSSRE ALDWDRVKDS
NDIAALQKFI KRYPDSPRSI AAQSRVELLQ QIAREREQRA RAEREAAARA AELAKLQAAQ
KKAEEAATRQ REQDERRAQK AEAEAKAKAE DAERKAAEAK RKADEADRQK SAQEAAALRA
ESEKRARQAE DERRKAAEAA IQETVCKDQQ AQFDALNSKS DAPSALDDMK VLAKSITCSR
LQPMVAMAID RLKLEADKRA AAMPNSPQLV RSAQTELARI GCLTDKPNGV LGDPTRTALG
RYLSIKGQSS SDLSVTEALV ADLGKQSGRV CPLVCKAGEI AKGDACIASE KRDEPKAAAR
RQRDDEDDRA ARRKPARREA QQERRQSRPE PRARQQATSR PSGGAAAMIG VGF
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