| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0854 |
|---|
| Symbol | |
|---|
| ID | 3909112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 979210 |
|---|
| End bp | 980211 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637882747 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_484476 |
|---|
| Protein GI | 86747980 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTTGC AGTTTGAAGC GGCGTGCGGT CGTCGCAAGA AGTCTATTTT GGGTGTGGCG
CTGAGCATTC TGGCGCTCGG GTCGATGCTG CCGGTCTCGG CGGACGCCGG CGACGCGCCG
TCCTGGCTGT CCACCGCCTC GGCCTCGTCG ACCAGCGCTG CCGTGCGGGC CGTCAAGCCG
CGCGCCGAGC TGCTCGACGC GCAGGCGCAG CACGACGGCG TCGATACCGA GCACATCTTC
GGCTTCAGCA TGGGCTCCGA CATCGGCAAG AAGGGCGAGA TCGAGCTCGA GATCGAGAAT
GTCGGGCGCT TCAACAGGCG CGCCGGCTCG TATACCGGCG TCGGCGTGCT GTCGCAGGTC
AAGTTCGTGC TCACCGACAA TTTTCGCGTG GCGCCGGGCA TCAGCTTTGC CTCGACCAGG
GTCAGCGGCG TGCCGGACAT GATCGACAAC CGCCGCACCG CGGTCGCCGG CGCGTCGCTG
GAATTCCGCT ACAAAGTGCT CGACCGCGAC GTGATGCCGT TCGGTCTGAC GCTGCACGCC
GCGCCGGCGT GGAACAGGTT CGACGAACTG ACCGGCTTCG ACGTCCAGAC CTATGGCAGC
GAGTTCGCCG CGCTGATGGA CAAGGAGCTG ATCCGCAACA CGCTGTTCGC CACCGTCAAC
GTCTGGTACT CGGGCGGCGC GTCGCGCGAC CTCAGCAACG CGTGGTCGCG CGATTCGGAG
TTCTCGGTGA ACGGAGCCAT GTCCTATAAA GTCGGCCCGG ATCTGATCCT CGGCGCCGAG
GCGCGCTATT TGCGGGCCTA TGACGGCCTC GGCCTCGACC GCTTCGTCGG CGACGCGGTG
TATCTCGGCC CGACCTTCTC GATGCATCTG GCGCACAATG TCGGCCTGTC GGGCACCTGG
AGCACGCAGG TCGCGGGCAG GGCGATCAAC GACCCGCGGC GTCTCGACCT CACGAATTTC
GAGCGCCACC AGGCGATGCT GCGTCTCAAT TATCTGTTCT GA
|
|---|
| Protein sequence | MVLQFEAACG RRKKSILGVA LSILALGSML PVSADAGDAP SWLSTASASS TSAAVRAVKP
RAELLDAQAQ HDGVDTEHIF GFSMGSDIGK KGEIELEIEN VGRFNRRAGS YTGVGVLSQV
KFVLTDNFRV APGISFASTR VSGVPDMIDN RRTAVAGASL EFRYKVLDRD VMPFGLTLHA
APAWNRFDEL TGFDVQTYGS EFAALMDKEL IRNTLFATVN VWYSGGASRD LSNAWSRDSE
FSVNGAMSYK VGPDLILGAE ARYLRAYDGL GLDRFVGDAV YLGPTFSMHL AHNVGLSGTW
STQVAGRAIN DPRRLDLTNF ERHQAMLRLN YLF
|
|---|
| |