| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0780 |
|---|
| Symbol | |
|---|
| ID | 3909268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 873749 |
|---|
| End bp | 874465 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637882672 |
|---|
| Product | phosphate uptake regulator, PhoU |
|---|
| Protein accession | YP_484402 |
|---|
| Protein GI | 86747906 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0704] Phosphate uptake regulator |
|---|
| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.287945 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTTCG AGCACACCAC CAAGGCGTTC GACGGCGACC TGCAGGAGCT GACCCGGATG
GTCGCCGAGA TGGGCGGCCT GGCCGAGCGC CAGATCGTCG ATTCGGTCGA CGCGCTGGTC
CGGCGCGACG TCGCACTCGG CGCCCGCGTC GTCGCGGCCG ATTCCGAGAT CGACCAGATG
CAGCGCGTCA TCGAGGAGCG CGCCGTGCTG ACGATCGCGC GGCGGCAGCC GATGGCGGTC
GACCTGCGCG AGATCGTCGG CGCGATGCGC GTCGCCACTG ATCTCGAGCG GATCGGCGAC
CTGTCGAAGA ACATCGCCAA GCGGGTCAAC GCGATCGACA GCGACTTCCA CCCGCTGAAG
CTGATCCGCG GCCTCGAGCA CATGACCGAC CTGGTGCAGT CGCAGGTCAA GTCGGTGCTG
GACGCCTACA CCGCGCACGA CCTGCCGGCC GCGATGGTGG TGTGGAACGG CGACGAGGAA
GTCGACGCGA TCTGCACCTC GCTGTTCCGC GAGCTCTTGA CCTACATGAT GGAAGATCCG
CGCAACATCT CGTTCTGCAT CCACCTGATG TTCTGCGCCA AGAACATCGA GCGGATCGGC
GATCACGCCA CCAACATCGC CGAGACGGTG TTCTACATGG TCGAGGGCGA GCAGCTTCTC
GAAAAGCGCC CGAAGGGCGA CATGACGACT TTCGCCAACG CGACGCCGGG CAACTGA
|
|---|
| Protein sequence | MGFEHTTKAF DGDLQELTRM VAEMGGLAER QIVDSVDALV RRDVALGARV VAADSEIDQM
QRVIEERAVL TIARRQPMAV DLREIVGAMR VATDLERIGD LSKNIAKRVN AIDSDFHPLK
LIRGLEHMTD LVQSQVKSVL DAYTAHDLPA AMVVWNGDEE VDAICTSLFR ELLTYMMEDP
RNISFCIHLM FCAKNIERIG DHATNIAETV FYMVEGEQLL EKRPKGDMTT FANATPGN
|
|---|
| |