Gene RPB_0669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0669 
Symbol 
ID3908596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp754110 
End bp754526 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content66% 
IMG OID637882560 
Producthistidine triad (HIT) protein 
Protein accessionYP_484291 
Protein GI86747795 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.287945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCG ATTGGTCGCT CAGTCCTCAG CTCGAAAAAG ACACCATCAA CATCGGCGAT 
CTGCCGCTCA GCCGCGTGCT GGTGATCAAG GACGCGAATT ATCCGTGGCT GCTGCTGGTG
CCGCGCCGCG CCGGCGCAGT CGAGATCACC GACCTCGACG AGGTCGCGCA GGCGCAGTTG
ATGACGGAAA TCTCCCGGGT CGGCCGCGCG CTCAAGGACA TCACCAAATG CGACAAGCTG
AACATCGCCG CCCTCGGCAA TGTGGTGCCG CAGCTGCATG TCCATGTGAT CGCGCGACGC
GCCAACGACG CCGCCTGGCC GCGCCCGGTG TGGGGCGTGG TGCCGGCGCT GCCGCACGAC
GCCGAGGAAG TGCAGCACTT CATCAGCGCG CTGCGGCGCA AGATCTGGCT GGGCTGA
 
Protein sequence
MPADWSLSPQ LEKDTINIGD LPLSRVLVIK DANYPWLLLV PRRAGAVEIT DLDEVAQAQL 
MTEISRVGRA LKDITKCDKL NIAALGNVVP QLHVHVIARR ANDAAWPRPV WGVVPALPHD
AEEVQHFISA LRRKIWLG