| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0552 |
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| Symbol | |
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| ID | 3909591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 621810 |
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| End bp | 623303 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637882440 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_484174 |
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| Protein GI | 86747678 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4784] Putative Zn-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.125277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0387817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGCAT CCGAGGGACG GCGCAGCATC TGGAGAAGCC GCCGCTGGCT GGCTGTGCCT
GTCCTGGCGG GCGCGCTGGC GCTGGCCGGC TGCGGCGATT TTCGCCGCTT CGAGACCGCG
TCGATTCCCT CCAGCACGCC GGCGGCAAAG CCGTCGCGTC CGGCGGCGCA ATCGCCGGCG
GCCGAGCGCG AGCACGAGCG CATCCTCGCC ACCTATGGCG GCGCCTATGA CGATCCGAGG
CTCGAAGCGC TGATCACCGC GACGGTCGAT CGGCTGGTGG CGGCGTCCGA CCGTCCCGAC
CTCACCTACA AGGTGACGAT CCTGAATTCC GGCGCCGTCA ACGCCTTCGC GCTGCCGACC
GGGCAGCTCT ACGTCACCCG CGGGCTGGTC GCGCTCGCCA GCGACACCTC GGAACTGTCG
TCGGTGCTGT CGCACGAGAT GGCGCATGTG CTGGCCAAGC ACGCCGCGAT CCGGGAGGAC
CAGGCGCGCC AGGCGGCGCT GGTCACCCGC GTCGTCACCG ACATGGGCAC CGATCCGGAG
ATGACCGCGC TGGCGCTGGC CAAGACCAAG CTGTCGATGG CGAGCTTCTC GCGGCAGCAG
GAGCTCGAGG CCGACGGCAT CGGCGTCGGC ATCTCGGCGC GCGCCCAGTT CGATCCGTTC
GGAGCTTCGC GTTTCCTCAC CGCGATGGAG CGCAACGCGG CGCTGAAGGC GGGCCGCGGC
GATGCGCGCT CGCAGGACTT CCTGGCGTCG CACCCGGCGA CGCCGGAGCG GGTGCGCAAC
GCGCAGAACA ACGCCCGGCA ATACGCCTCG CCGGAGCAGA CCGCCAAGGG CGAGCGCGAC
CGTGAGACCT ATCTCAACGC CATCGACAAC ATCGTCTATG GCGAGGACCC GAGCGAGGGC
TTCGTCCGCG GCCGCCGCTT CCTGCATCCC AAGCTCGGCT TCACCTTCCA GGTGCCGGAG
AGCTTCACGC TCGACAACAC CGCGCAGGCG GTGATCGGCA TCCGCGAAGG CGGCAGCCAG
GCGATGCGGT TCGACGTGGT GCGGGTGCCG GCGGAACAGT CGCTCGGCGA CTACCTCAAT
TCCGGCTGGA TGGAGAACGT CGACAAGAGT TCGACCGAAG AACTAAGCAT CAACGGCTTT
CCGACCGCCT CGGTGGCGGC GCGCGGCGAT CAGTGGCAGT TCAAGGTCTA TGCGTTGCGG
TTCGGCAGCG ACGTCTATCG CTTCATCTTC GCGACCCGGC AGAAATCGGC CGAAAGCGAC
CGCAATTCGC GCGACACCGT GAATTCGTTC CGACGTCTGA CGCTCGACGA GATCCAGGCG
GCGCGGCCGT TGCGGATCAA GGTGATCACC GTACAGCCGG GCGACACGGT GGAATCGCTG
TCGCACCGGA TGTCCGGCGT CGACCGCCCG CTCGACCGCT TCCGGGTGCT GAACGGCCTC
GACGCCAACG CCACCGTGAA GCCGCGCGAT CTGGTCAAGA TCGTGGTGGA TTAA
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| Protein sequence | MIASEGRRSI WRSRRWLAVP VLAGALALAG CGDFRRFETA SIPSSTPAAK PSRPAAQSPA
AEREHERILA TYGGAYDDPR LEALITATVD RLVAASDRPD LTYKVTILNS GAVNAFALPT
GQLYVTRGLV ALASDTSELS SVLSHEMAHV LAKHAAIRED QARQAALVTR VVTDMGTDPE
MTALALAKTK LSMASFSRQQ ELEADGIGVG ISARAQFDPF GASRFLTAME RNAALKAGRG
DARSQDFLAS HPATPERVRN AQNNARQYAS PEQTAKGERD RETYLNAIDN IVYGEDPSEG
FVRGRRFLHP KLGFTFQVPE SFTLDNTAQA VIGIREGGSQ AMRFDVVRVP AEQSLGDYLN
SGWMENVDKS STEELSINGF PTASVAARGD QWQFKVYALR FGSDVYRFIF ATRQKSAESD
RNSRDTVNSF RRLTLDEIQA ARPLRIKVIT VQPGDTVESL SHRMSGVDRP LDRFRVLNGL
DANATVKPRD LVKIVVD
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