| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0533 |
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| Symbol | |
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| ID | 3909572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 599413 |
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| End bp | 600456 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637882421 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_484155 |
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| Protein GI | 86747659 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAC CGCGAGCAAG ATTCAGTCCT TCAGCCAGCG TCCCGGCCAC CGCTGCCGGC
GAGCGGGAGG CCGCGCCGCT GCGGCCCACC TCATATTCCG ATGCCGGACT GAGCGAGCTG
TTCCTCGACA TGATCGCGGC CGAACAGGGC GCCTCCGCCA ACACGCTCGA CGCCTACCGC
CGCGACCTCG CCGACCTGTC GCACTACCTC GGCCGCCGCC GCAAGAGCAT CGCCTCCGCC
GACACCGAGG CGCTGCGCGG CTATCTCGCC GATCTGGATA CCCGCGGCTT CGCATCGACG
AGCGTCGCGC GGCGGCTGTC GGCGCTGCGG CATCTGTTTC GATTCCTGCT GAGCGAGCGG
ATCCGGGTCG ATGATCCGGC GGCGATCCTG TCCGGACCGA AGCGCGGCCG CGGGCTGCCC
AAGGTGCTTT CGATCGCCGA TGTCGACCGC CTGCTCGGCT GCGCGCGCCA GGAGGCCGAC
GCCGCCGAGG GCGCGGCGGG GCTGCGCGCG GCGCGGCTGT ATTGCCTGCT GGAGGTGTTG
TACGCGACCG GGCTGCGCGT CTCCGAACTG GTGGCGCTGC CGCGGACGGC GGCGCGGGGC
GATGCCCGGA TGATCGTGGT CCGCGGCAAG GGCGACAAGG AGCGGCTGGT GCCGCTCAAT
GGCAGTTCCA AAGCCGCGAT GACGCGCTAT CTCGCGACCG CCGCGGCGGC CGAAAAGGCC
GCGGCCGGCG GCAAGAAGAC CGCCGCGCCC GCGTCCAAAT GGCTGTTTCC GTCGTTCGGC
GAGAGCGGCC ATCTGACCCG GCAGCATTTC GCCCGCGACC TCAAGGAGCT CGCCGCGCGC
GCCGGGCTGC CGCCGCGGCT GGTCAGCCCG CATGTGCTGC GCCACGCCTT CGCCAGCCAT
CTGCTGCACA ACGGCGCCGA TCTGCGGATC GTCCAGACCC TGCTCGGTCA CAGCGACATC
TCGACCACGC AGATCTATAC CCATGTGGTC GAAGACCGGC TGAAGAGCCT GGTCCGCGAC
CTGCATCCGC TGGCGGAAGG CTGA
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| Protein sequence | MRKPRARFSP SASVPATAAG EREAAPLRPT SYSDAGLSEL FLDMIAAEQG ASANTLDAYR
RDLADLSHYL GRRRKSIASA DTEALRGYLA DLDTRGFAST SVARRLSALR HLFRFLLSER
IRVDDPAAIL SGPKRGRGLP KVLSIADVDR LLGCARQEAD AAEGAAGLRA ARLYCLLEVL
YATGLRVSEL VALPRTAARG DARMIVVRGK GDKERLVPLN GSSKAAMTRY LATAAAAEKA
AAGGKKTAAP ASKWLFPSFG ESGHLTRQHF ARDLKELAAR AGLPPRLVSP HVLRHAFASH
LLHNGADLRI VQTLLGHSDI STTQIYTHVV EDRLKSLVRD LHPLAEG
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