Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0224 |
Symbol | |
ID | 3909466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 252011 |
End bp | 252964 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882106 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_483846 |
Protein GI | 86747350 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.843746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCGTCT ACATCGCCCG CCGCATCGTC TATGTGATTC CGATCGTGCT CAGCGTCGCG CTGGTGTGCT TTCTCCTGGT GCACATCACG CCCGGCGATC CGCTGGTCGC GGTGCTGCCG GCGGATGCGT CACAGGAGCT CGCCGCGCAG CTGCGCGCCG CCTACGGCTT CGACCGGCCG CTGCCGGTGC AGTTCGGGCT GTGGCTGTGG AAGGCGCTGC ACGGCGATCT CGGCACCTCG ATCGCGACCG GCCGCCCGGT GCTGAGCGAA GTGCTGCGCG CCGTCGGCAA CACCGTGACG CTGGCGATCG CGGCGGCGAT CATCGGCTTT TCGCTCGGGC TGATGTTCGG CCTGCTGGCC GGTTACTTCC GCGATAGCTG GATCGACAAA GTCTCGACCT CGATCGCGAT CGCCGGCGTC TCCGTGCCGC ATTACTGGCT CGGCATGGTG CTGGTGATCA TCTTCTCGGT GCAGCTCAAC TGGCTGCCTG CGGTCGGCGC CGGCCCCGGC GGCTCGGGGC AATGGGGCTG GGACTGGGCG CATCTGAAAT ATCTGGTGCT GCCGGCGATC ACCACGTCCG TTATTCCAAT GGGCATCGTC ACCCGCACCG TGCGGGCGCT GACCGGTGAT ATCCTGTCGC AGGACTTCGT CGAGGCGCTG CGCGCCAAGG GGCTGCGCGA GACGCAGGTG TTCCGCCACG TGCTGAAGAA CGCAGCCCCG ACCGCGCTGG CGGTGATGGG CTTGCAGCTC GGCTACATGC TCGGCGGCTC GATCCTGATC GAGACGGTGT TCTCCTGGCC GGGCTCGGGG CTGTTGCTCA ACTCCGCGAT CTTCCAGCGC GATTTGCCGC TGCTGCAGGG CACCATCCTG GTGCTGGCGC TGTTCTTCGT GTTCCTCAAT CTGGTGGTGG ACATCGCGCA GGCCGCGATC GACCCGCGCA TCAAGCGCGC CTGA
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Protein sequence | MLVYIARRIV YVIPIVLSVA LVCFLLVHIT PGDPLVAVLP ADASQELAAQ LRAAYGFDRP LPVQFGLWLW KALHGDLGTS IATGRPVLSE VLRAVGNTVT LAIAAAIIGF SLGLMFGLLA GYFRDSWIDK VSTSIAIAGV SVPHYWLGMV LVIIFSVQLN WLPAVGAGPG GSGQWGWDWA HLKYLVLPAI TTSVIPMGIV TRTVRALTGD ILSQDFVEAL RAKGLRETQV FRHVLKNAAP TALAVMGLQL GYMLGGSILI ETVFSWPGSG LLLNSAIFQR DLPLLQGTIL VLALFFVFLN LVVDIAQAAI DPRIKRA
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