| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0207 |
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| Symbol | |
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| ID | 3909448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 233069 |
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| End bp | 234184 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637882088 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_483829 |
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| Protein GI | 86747333 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.387162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCGATG ATCGAGGTCA GGCCGGATCG GCGTCACAAT CGGGTGCCTG GCGCCGTCTG
GCGATTCCGT TGCTCGCCGT CAGTGCGGCG GTTGCGTTCA CCATCGTGGC GACGCTGCGG
TGGGATGCCT GGATCGGCAG CCGTGCGGTG CAGACCACCG ACGACGCCTA TGTCCGCGCC
CAGATCACGC AGTTGAGCAG CCGCGTTGCG GGCGCGGTCA AGACGGTCGC GGTCGACGAC
TTCCAGCGCG TCAAGGCAGG TGATCTGCTG ATCCAGATCG ATCCGGCCGA TTACATCGCG
CAGGTCGAGC AGGCGGAGGC GGCGGTGGCC GGCGCCGAGG CCGCGCTCGA CAATCTCGCC
AACCAGATCG ACCTGCAGAA CGCCACGATC GAGCAGGCCG AGGCGCAAAG CGTGTCGGCG
CAGGCGCTCG AAGTGGAGGC GCAGCAGGAA GACCAGCGCC AGCAGGCGCT GGTACGGACC
GAAGCCGGCA CCGTACAGAA ATTCCAGCAG GCGGTCGCCG CCTATGCCAA GGCCAAAGCC
GATGTCAGAG CCGCCATCGC GGTGGTGGCG GCACAACGCC AGCAAATGGC CGTGCTGGCC
GGCACACGAC AGCAATTGAC CGCCACGTTG CACGGCGCGA AGGCCACCCT CGATGCCGCG
AAATTGCGCC TCGGCTACAC CAGAATCGTC GCGCCGTTCG ACGGCGTCGC CAGCGAGCGG
CAGGTGCAGC CCGGCGACTA CGTCAACACC GGCAGCAATC TGATCAACGT GGTGCCGCTA
CCGCGGGTCT ACGTCATCGC CAACTACAAG GAGACTCAGC TGCGTCGGGT TCGGCCCGGA
CAACGCGTGA CCATCGTGGC GGACACGTTC TCCGGCCAGA CGCTGAAGGG CGAGGTCGAG
CGGATTTCGC CGGCCAGCGG TTCGCAATTC GCTCTGCTGC CGCCCGACAA TGCCACCGGC
AATTTCACCA AGGTGGTGCA GCGGATCCCG GTCCGGATCC AGTTCGCGCC CGGCCAGCCG
CTGCTGGAGC GGTTGCTGCC GGGCATGTCG GTCACCACCC GAATCCATGC CGATGACGGT
CCGGTCGGAG ATCATGTCGA CAGCGCACAT CGTTGA
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| Protein sequence | MSDDRGQAGS ASQSGAWRRL AIPLLAVSAA VAFTIVATLR WDAWIGSRAV QTTDDAYVRA
QITQLSSRVA GAVKTVAVDD FQRVKAGDLL IQIDPADYIA QVEQAEAAVA GAEAALDNLA
NQIDLQNATI EQAEAQSVSA QALEVEAQQE DQRQQALVRT EAGTVQKFQQ AVAAYAKAKA
DVRAAIAVVA AQRQQMAVLA GTRQQLTATL HGAKATLDAA KLRLGYTRIV APFDGVASER
QVQPGDYVNT GSNLINVVPL PRVYVIANYK ETQLRRVRPG QRVTIVADTF SGQTLKGEVE
RISPASGSQF ALLPPDNATG NFTKVVQRIP VRIQFAPGQP LLERLLPGMS VTTRIHADDG
PVGDHVDSAH R
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