| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0150 |
|---|
| Symbol | |
|---|
| ID | 3908121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 163912 |
|---|
| End bp | 165447 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637882032 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit D |
|---|
| Protein accession | YP_483773 |
|---|
| Protein GI | 86747277 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCACC TGATCGTCGC CCCGATCATC CTGCCCGCCG TCGTCGCCGC CTTCCTGGTG
CTGGTGCTGC GGCACGATCT GACCAGCCAG CGCATCGTCT CGATGGCGTC GACGCTCGTG
CTGCTCGCGA TCACGATCTG GCTCTATGTG TCGGCGGCGG AGGGCGCGCC GACGCCCTAT
CTGCTCGGCG AATGGCGCGC GCCGTTCGGC ATCGTGCTGG TGCTCGACCG CCTCGCGGCG
ACGATGCTGC TGCTGACGGC GCTGCTGGCC GTCGCGGTGC TGATCTATGC GATCGCCGGC
TGGGACCATC GCGGCCAGCA TTTCCATCCG CTGTTCCAGT TTCAGCTGAT GGGCCTCAAC
GGCGCTTTCC TGACCGGCGA CGTGTTCAAT TTGTTCGTGT TCTTCGAGGT CATGCTGATC
GCCTCCTACG GCCTGATGCT GCATGGCGGC GGCGCGCGGC GGCTGCGCAC GGGCTTCCAC
TATATCGCGA TCAATCTGGT CGGCTCGACG CTGTTCCTGT TCGCCGTCGG CCTGATCTAC
GCGGTGACCG GCACGCTCAA CATGGCGGAC CTCGCCGCCC GGGTGGCGCA GATCGCGCCC
GGCGACGAAG CCATCCTGCG CGTCGGGGCG CTGCTGCTGC TGCTGGTGTT CGCGCTCAAG
GCCGCGTTGG TGCCGCTGCA ATGGTGGCTG CCCTCGGCCT ATGCGGCGGC GCCGGGGCCG
GTGGCGGCGC TGTTCATGAT GATGACCAAG GTCGGTGCCT ATTCGATCGT GCGGGTCTAC
ACTGTAGTGT TCGGCGCCGA CGCCGGCGCG TTGGCGGACA TCGCCGCGCC CTGGGTGGTG
CCCGCGGCGC TGGCGACGCT GGCGCTCGGC GCGGTCGGCG TGCTGGCGAG CCCGACCTTG
CTGGGGATGG TCTGCTTCTC GATCGTCTGG TCGATGGGCT CGCTGCTGCT GGCGCTCGGC
CTGTTCGACC CGGTCGGCCT GTCCGCCGGG CTGTATTATC TGCTGCACTC AACGCTGAGC
GGCGCCGCGC TGTTCCTGCT GGCCGATCTG GTCGCCGCGC AGCGCGGTCG CCTCGCCGAC
CGGCTGGTGC CGGCGCCGCG GCTGCCCCAT GCCGATCTGC TCGCCGGGCT GTTCTTCGTC
GCGGCGATCG CCATGACCGG GATGCCGCCG CTGTCGGGTT TTCTCGGCAA GCTGTTGATC
CTCGACGCGA CCTGGCGCAG CCCGCTCGCG GTGACGAGCT GGGTGATCCT GCTCGGAAGC
AGCCTTCTGG TGATCGTCGG CTTCGCCCGC GCCGGCAGCA CGCTGTTCTG GAAGATCGCC
GACCGGCCGG CCGAGCCGGC CGAACCGGCG CGGTCGATCG CGCTGCCGGT CACGGTGATC
GCCGGTCTGC TCGGCGCCAC CGCGCTGCTG TCGGTGTTCG CCGGCCCGAT CAGCCGCGAA
CTGGCGGCGA CGGCGCAACA GACGCTCGAC ATCAAGGCCT ATGTCCGCGC GGTGAACCCC
GCCGACCTGG CACTGTCGCG GGGGGCGCCG CAATGA
|
|---|
| Protein sequence | MSHLIVAPII LPAVVAAFLV LVLRHDLTSQ RIVSMASTLV LLAITIWLYV SAAEGAPTPY
LLGEWRAPFG IVLVLDRLAA TMLLLTALLA VAVLIYAIAG WDHRGQHFHP LFQFQLMGLN
GAFLTGDVFN LFVFFEVMLI ASYGLMLHGG GARRLRTGFH YIAINLVGST LFLFAVGLIY
AVTGTLNMAD LAARVAQIAP GDEAILRVGA LLLLLVFALK AALVPLQWWL PSAYAAAPGP
VAALFMMMTK VGAYSIVRVY TVVFGADAGA LADIAAPWVV PAALATLALG AVGVLASPTL
LGMVCFSIVW SMGSLLLALG LFDPVGLSAG LYYLLHSTLS GAALFLLADL VAAQRGRLAD
RLVPAPRLPH ADLLAGLFFV AAIAMTGMPP LSGFLGKLLI LDATWRSPLA VTSWVILLGS
SLLVIVGFAR AGSTLFWKIA DRPAEPAEPA RSIALPVTVI AGLLGATALL SVFAGPISRE
LAATAQQTLD IKAYVRAVNP ADLALSRGAP Q
|
|---|
| |