Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0135 |
Symbol | |
ID | 3908106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 146884 |
End bp | 148467 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882017 |
Product | GntR family transcriptional regulator |
Protein accession | YP_483758 |
Protein GI | 86747262 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.868038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGAAAGC TCGCACAGCT CGCTTATCAG GAAGCCGGTC GCAACGGTTC GCTCGATCGT TCGGCAAATG CCTCCGCGAA TGCCGCATCG TTAGGCAACA GCGATGCGCT GTTCTGGGGC GCCTTATTCC GCGGAATGGA TCGCGGCGGG TCGTTTCTGC AACTGCAGAT CCGCCAGATC ATCGTCACCG CGATCGAAGA CGGCCGGCTG CCGCTCGGGA TGCGGATGCC GTCGAGCCGC GATCTCGCCG CGGTGCTCAA GGTGTCGCGC AACACCGTTG TGATCGCCTA CGAGCAGCTG GTCGACCAGA ACTTCCTGGT GTCGCGGCAG CGCAGCGGCT ACTTTGTCGC CGGCCTGTCG AAGAAGGTCG CCTCCGGCGC CGGCAAGCCT GCCGAGGCGG CGAGCCGCGA CGATGCGCAT TGGGCCGCGC GCTACGCGGT GCAGCCGTCG GCGCATCGCA ACATCGTCAA GCCCGCCGAC TGGCAGGCGC AGCCCTACCC TTTCATCTTC GGGCAGTTCG ACCCCAGCCT GTTTCCGACC AACGACTGGC GCGAATCCGC GCGGGCCGCG CTGAGCGTCC CCGAGATCAA CAACTGGGCG CGTGACCTGA TCGACGGCGA CGACCCGGCG CTGATCGAGC AGTTGCAGCT TCAGGTGCTG CCGCGCCGCG GCATTCATGC GCGCTCCGAC GAAATCATGA TGACGATCGG CGCGCAGCAC GCGCTGTATC TGATCGCGAC GCTGTTCATC AACGACCGCA CCCGCGTCGG CATCGAGGAG CCCGGCTATC CCGACGCGCG AAACATCTTC CGGATGCTGA CGCCCGACGT CGTCCCGCTC GCCTCCGACG CGCAGGGCCT GTTGCCGGAC GAGCGCTTGC AGAGTTGCGC GCTGGCCTAT GTCACCGCCA GCCATCAATG CCCGACCGCG ACGGTGATGC CACTGCAGCG GCGACTGGAG TTGCTCAAGG CCGCCGAGAC CGGCGACGTC GTGCTGGTGG AGGACGACTA CGAGGGCGAA CTGATGCCGG AGGCGGCGAC GCTGCCGCCG CTGAAGAGCC TCGATCACGC CAGCAACGTG CTCTATGTCG GCAGCCTGTC GAAGGCGCTG GCACCCGGGC TGCGGCTCGG CTACGTGGTG GCGCCCGCGC CGGTGATCCG CGAGCTGCGG GCGCTGCGGC GGCTGATGCT GCGCCACCCC CCGCTCAACA ACCAGCGCGT CGCCGCATTG TTCATCGGGC TCGGGCACTA TCGCTCGCAT CTGGCCCAGG TCGGCCGCGT GCTGCTGGAG CGCGCCAAGA TGCTCGACCG CCTGCTGCCG AAACATCTGC CGGACTGCAG CTTCTCGCGC GGACCGGGCA GCACCAACTA CTGGATCGCC TGCCCGCCCG GTACCGACAC CACGGCACTG GCGCGGGAAG CGCTGGCGCA GGGCGTGGTA ATCGAGCCGG GCGCGGTGTT CTCGATGGAC GAGACCGCCA GCCGGCATTG CTTCCGGCTC GGCTTCTCCT CGATCCGCAC CGACCGGATC GAAACAGGCA TCCAGCGCCT CGGCGAAGTG ATTGCGGAGT ATTTGAAGAA GTAG
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Protein sequence | MGKLAQLAYQ EAGRNGSLDR SANASANAAS LGNSDALFWG ALFRGMDRGG SFLQLQIRQI IVTAIEDGRL PLGMRMPSSR DLAAVLKVSR NTVVIAYEQL VDQNFLVSRQ RSGYFVAGLS KKVASGAGKP AEAASRDDAH WAARYAVQPS AHRNIVKPAD WQAQPYPFIF GQFDPSLFPT NDWRESARAA LSVPEINNWA RDLIDGDDPA LIEQLQLQVL PRRGIHARSD EIMMTIGAQH ALYLIATLFI NDRTRVGIEE PGYPDARNIF RMLTPDVVPL ASDAQGLLPD ERLQSCALAY VTASHQCPTA TVMPLQRRLE LLKAAETGDV VLVEDDYEGE LMPEAATLPP LKSLDHASNV LYVGSLSKAL APGLRLGYVV APAPVIRELR ALRRLMLRHP PLNNQRVAAL FIGLGHYRSH LAQVGRVLLE RAKMLDRLLP KHLPDCSFSR GPGSTNYWIA CPPGTDTTAL AREALAQGVV IEPGAVFSMD ETASRHCFRL GFSSIRTDRI ETGIQRLGEV IAEYLKK
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