| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0130 |
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| Symbol | |
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| ID | 3908101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 140460 |
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| End bp | 141380 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637882012 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_483753 |
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| Protein GI | 86747257 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC TCGACCAGAC GCTGATCGTG GCGCAGACCG CGCCGCCGCC CGCGGCGCCG
GGCGCACTGC CGGCCGCCAA GGCGGTGTCG CCGGCCAGCG CCGCGTTTCG TCAATTTCTG
AAGAGCCCGT CCGGCGTCGC CGGCGCGGTG CTGCTGATCG TGCTGGTGTC GGGGACGTTG
TTCGGGCCGT GGATCTATTC GCTCGACCCG CTGGAAATCG TCGGCCTGCC GTTCACGCCG
CCGTCCGCCG ATGCCTGGCT CGGCACCGAC TATCTCGGCC GCGACGTGCT CGCGGGGCTG
GTGCATGGCG GCCGCGCGAC GCTCACGGTC GGCGCCGTCG CGGCGCTGCT CACCATCGCC
ATCGGCGTGA CGGTCGGCTC GCTGGCGGGT TTCTTCGGCG GATGGATCGA CAGCCTGCTG
GTGAAGATCG CCGAATTCTT CCAGGTGCTG CCGCCGCTGT TGTTCGCGAT GGTGCTGGTG
ACGCTGTTCG GGCCGAAACT CATGACCATC ACGCTGGCGA TCGGCGCGGT GAGCTGGACT
TCGGCGGCGC GGCTGACGCG CGCGGAATTC ATGCGGCTGC GCGATCTCGA TTTCATCAAG
GCCTCGCGCG CCGCCGGCGC CGGCAATCTG CATCTGATCC TGCGGGTGGT GCTGCCCAAT
GCGCTGCCGC CGATCATCGT GTCGGCGACG CTGGCGATCG GCGTCGCCAT CCTGTTCGAG
GGCGGGCTGA GCTTCCTCGG CCTCGGCGAT CCCAACACCA TGAGCTGGGG CCTGATGATC
GGCCAGAACC GCAACTACGT GCTCGACGCC TGGTGGGCGG TGACCTTCCC CGGCGCCGCG
ATCTTCCTGT CGGTGCTGGC GATCAGCCTG GTCGGCGACG GCATCAACGA TGCGGTCAAT
CCGCGGCTGC GACGGAGGTG A
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| Protein sequence | MSTLDQTLIV AQTAPPPAAP GALPAAKAVS PASAAFRQFL KSPSGVAGAV LLIVLVSGTL
FGPWIYSLDP LEIVGLPFTP PSADAWLGTD YLGRDVLAGL VHGGRATLTV GAVAALLTIA
IGVTVGSLAG FFGGWIDSLL VKIAEFFQVL PPLLFAMVLV TLFGPKLMTI TLAIGAVSWT
SAARLTRAEF MRLRDLDFIK ASRAAGAGNL HLILRVVLPN ALPPIIVSAT LAIGVAILFE
GGLSFLGLGD PNTMSWGLMI GQNRNYVLDA WWAVTFPGAA IFLSVLAISL VGDGINDAVN
PRLRRR
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