| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0104 |
|---|
| Symbol | |
|---|
| ID | 3909690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 114968 |
|---|
| End bp | 116236 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637881985 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_483727 |
|---|
| Protein GI | 86747231 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1231] Monoamine oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAGC AACGCTTCCC CTCCTCCGTC GATATCGCCA TCATCGGCGC GGGCGCGGCC
GGCCTCGGCG CCGCCCGAAC GCTGGAGAAT TCCGGCCTGT CGGTGATCGT GCTGGAGGCG
CGCGACCGGG TGGGCGGCCG CGCCTTTACA AGGATGGTGA CGCCCGAGAT CGCCTTCGAC
GTCGGCTGCG GCTGGCTGCA TTCGGCCGAC GAGAACTGCT TCGTCGGCAT CGCCGGGCAA
CTCGGCATCG CGATCGACAC TACCCACCCG CCGTGGAGCG AGCGAAGCTT CGGCGACGTG
TTTCCGCCAC GCCAGCGCGC CGCCTTCGGC AAGGCGCTCG ACGCCTTCTA CGAGCGCGTC
TGGCGCGCCG CCAAGCGCAA GACCGATGCG GCCGCCGCAA CCCTGCTCGA GCCCGGCAAC
CGCTGGAATC CGATGATCGA CGCGGTGTCG ACCTACGTCA ACGGCGCCGA ACTCGACCGC
ATCTCGATCC ACGACGTCGA GGCCTATCGC GACACCGGGG TCAACTGGCG GATTCGCGCC
GGCTACGGCG CGCTGATCGC CGCCTATGGC GCGCCGTGTC CGGTGGCGCT GAATTGCCCG
GTCAGCGTGG TCGATCACTC CGGCCTGCAA CTGAAGATCG AAACATCGCA AGGCCCGCTC
ACCGCGGACA AAGTGATTAT CACCGTGCCG ACCAACCTGA TCGCCGACGG GGCGATCCGG
TTTGTGCCCG AGCTTCCCGA CAAGGTCGAA GCCGCGCGCG GATTGCCGCT CGGCGCCGAC
GACAAGGTGA TGCTGAAGCT GTCCGACCCG AACGGCTTTC CCGCAGACGG CAATCTGCGC
GGCGCCACGA TGCGGGCGGC GATGGGGAGC TATCATCTGC GGCCGTTCGG CCTGGACTGC
ATCGAAGGAT TCTTCGGCGG TCGCTTCGCG CGTGAGCTGG AAGACGCCGG CGACGGCGCG
TTCGCGGCAC AGAGCATCGA CGAGATCGCC GACCTGCTCG GCAACGACAT TCGCCGCAAG
CTCACGCCGC TGGCGGAATC GCGCTGGTCG CGCGACCCGT TCACGCGCGG CTCCTACTCG
CACGCCTTGC CCGGCCACGC CGGCGCCCGC GCCATCCTGG CCGCGCCGGT CGACGACCGC
CTGTTCTTCG CCGGTGAAGC CACCTCCCCG CACTTCTTCT CCACCGCCCA CGGCGCAAGA
GATAGTGGCG AGCGGGCCGC CAGAGAGGTG ATGGCGCGAC GCGTAGTAGC GGTGGCGAAG
CTTGTGTGA
|
|---|
| Protein sequence | MSQQRFPSSV DIAIIGAGAA GLGAARTLEN SGLSVIVLEA RDRVGGRAFT RMVTPEIAFD
VGCGWLHSAD ENCFVGIAGQ LGIAIDTTHP PWSERSFGDV FPPRQRAAFG KALDAFYERV
WRAAKRKTDA AAATLLEPGN RWNPMIDAVS TYVNGAELDR ISIHDVEAYR DTGVNWRIRA
GYGALIAAYG APCPVALNCP VSVVDHSGLQ LKIETSQGPL TADKVIITVP TNLIADGAIR
FVPELPDKVE AARGLPLGAD DKVMLKLSDP NGFPADGNLR GATMRAAMGS YHLRPFGLDC
IEGFFGGRFA RELEDAGDGA FAAQSIDEIA DLLGNDIRRK LTPLAESRWS RDPFTRGSYS
HALPGHAGAR AILAAPVDDR LFFAGEATSP HFFSTAHGAR DSGERAAREV MARRVVAVAK
LV
|
|---|
| |