| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4960 |
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| Symbol | |
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| ID | 3370512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5880121 |
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| End bp | 5881464 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637655329 |
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| Product | hypothetical protein |
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| Protein accession | YP_238025 |
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| Protein GI | 66048184 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.286001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAC AAAGCCGCGT GATGTGGTCG GAAGGCATGT TCCTTTTGCC GCAACATTTC
CAATATCAGG ATGAGTTTCA TCAACATCAG CTTGCTGAGT CGACGCTGCG CTCCACGCCC
TTTCACTGGG GCGTGCAAAC GCTGGAAGTC GACGTCGAGG CGCTGGCGAC AGGCTCCCTG
CAACTGAAGC GTCTGAAGCT GGTGTTCCCG GACGGCAGCC TTTACGACGC GCCGCAGCAC
GACCCGCTGC CCGCCGCCCG CGACCTGAAA AACCTGCTCA AAGGCGGAGA AATCAAGGTC
TACGCGGCGC TCAAACTGCC TGAGCCCTTT GGCCTGAATT ACGTTGAAGA CGGCCAGGAA
CAGAAGAGCG CGCGACGTTT TCGCAAACAG TTCGACACCC TGCCGGACCT CAACGAAGGC
GATCTGGAAA ACGAAATCAC CAGCCTGCGC CTGAACGTGG TGATGCTGGT CGATGGCGAC
AGTCTGGATG GCTACAGCTA TTGCCCGATT GCCCGACTGG CACGCAACAG CATTGGCGGC
TTCAACCTGG ATGCGCATTT TGTGCACCCG ACGCTGCACG TGGGCACCCA CGAGACGCTG
GTCGGCCTCG GCAGACGTTT GATCAGCGTG CTGCAAGCCA AGAGCAAGGC GCTTTCAGGC
CGCCGCCGCG AGCGCGCTGA CCAGATCGCC GAGTTCGGCT CCAGCGACGT CACCTTGTTC
TGGCTGCTGA ATACCGTCAA CCGCGCCTAC CCGCAACTGG CTCACCTGCT GGCGCATCCA
CGCCTGCACC CGGAGCGCCT GTATCTGTTT CTGGCGGAAC TGGCGGGTGG TTTGCTGACC
TTCTCGCTGG ACACCCAGCT CACCGACATC CCCGATTACG ATCATCAGGA CCCGGCGGCC
TCGTTGGTCA AGCTCGACGA ACTGGTTCGT CTGCTGCTTG AAAACGTGAT TCCGAACCAG
TGCATCGTCA TCAACCTGAG TCAGGTCCGG CCTTCGTACT GGCAGGGCCA GTTGCTGGAC
CCGCGTCTTA CCGAAGCCGA CTTTTACATC TCGGTGCATG CCGACATGCC CGGCTCCAGC
CTGCTGGAAC TGGTGCCGCG CGCCTTCAAG GTCGGTTCGC CGGAAGACAT CGAAGTGGTG
GTCAACAGCG CCATGCCGGG CGTCACGCTG AACCACTCGA CGCGCCTGCC AAACGCCATT
CCGGTGCGCC TGGACAACCA TTACTTCTCC ATCGAGCCGC ATGGCCGCGT GTACGAACGC
ATGATGGAAG CCCAGGCCAT TTCCTTCTAC GCGCCCAGCG CGTTTACCAA TCTCAAGCTC
GAACTGTTGG CGGTGCTTAA ATGA
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| Protein sequence | MSKQSRVMWS EGMFLLPQHF QYQDEFHQHQ LAESTLRSTP FHWGVQTLEV DVEALATGSL
QLKRLKLVFP DGSLYDAPQH DPLPAARDLK NLLKGGEIKV YAALKLPEPF GLNYVEDGQE
QKSARRFRKQ FDTLPDLNEG DLENEITSLR LNVVMLVDGD SLDGYSYCPI ARLARNSIGG
FNLDAHFVHP TLHVGTHETL VGLGRRLISV LQAKSKALSG RRRERADQIA EFGSSDVTLF
WLLNTVNRAY PQLAHLLAHP RLHPERLYLF LAELAGGLLT FSLDTQLTDI PDYDHQDPAA
SLVKLDELVR LLLENVIPNQ CIVINLSQVR PSYWQGQLLD PRLTEADFYI SVHADMPGSS
LLELVPRAFK VGSPEDIEVV VNSAMPGVTL NHSTRLPNAI PVRLDNHYFS IEPHGRVYER
MMEAQAISFY APSAFTNLKL ELLAVLK
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