| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4935 |
|---|
| Symbol | |
|---|
| ID | 3370487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5850272 |
|---|
| End bp | 5851354 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637655304 |
|---|
| Product | dTDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_238000 |
|---|
| Protein GI | 66048159 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
|---|
| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATAC TCGTTACCGG GGGCGCAGGT TTCATCGGCT CTGCACTGAT CCGCCACCTG
ATAAACAACA CCGACCACGA AGTGCTGAAC TTCGACAAAT TGACCTACGC GGGCAACCTT
GAATCGCTGC AGTCGATTGC CACCGACACG CGCTATGAGT TCGTGCAGGC GGATATCTGC
GATCAGGCCC GTGTCAGCGC GGTGCTCGAG CGCTTTGCGC CGCAGGCGAT CATGCACCTG
GCGGCTGAAT CCCACGTCGA CCGCTCCATC GATGGTCCGG CCGAGTTCAT CCAGACCAAC
ATTGTCGGCA CGTACAGCCT GCTGGAAGCC ACGCGCGCCT GGTGGCTGAA ACTGCCGGAA
GCGCAGCGCC AGGCGTTCCG CTTTCACCAT ATTTCCACTG ATGAGGTGTA TGGCGACCTG
CACGGTGTCG ATGATCTGTT CACCGAAACC ACACCGTATG CGCCCAGCTC ACCTTACTCG
GCGAGCAAGG CGGCGTCCGA CCACCTGGTG CGTGCCTGGC ACCGTACCTA TGGCCTGCCG
GTGGTGGTGA CCAACTGCTC CAACAACTAC GGGCCGTTCC ACTTCCCGGA AAAGCTCATC
CCGCTGGTGA TTCTCAACGC CCTCGCGGGC AAGCCCCTGC CGGTGTACGG CAATGGCCTG
CAAGTGCGCG ACTGGCTGTA CGTCGAGGAT CATGCGCGGG CACTGCTCAA GGTGGTGACC
GAAGGTGAAG TCGGCGAGAC GTACAACATC GGTGGCCACA ACGAGCAGAA AAACATCGAC
GTGGTGCGTG GTATCTGCGC GCTGCTCGAT GAGCTCGCCC CGCAGCACCC GGCAGGCGTT
GCGCAGTACA GCGACCTGAT CACCTACGTG GTCGACCGTC CGGGCCACGA TCAGCGTTAT
GCCATCGATG CCGGCAAGAT CGACAAGGAG CTCGACTGGA CGCCCGAAGA AACCTTCGAG
TCCGGGCTGC GCAAGACTGT GCAGTGGTAC CTGGATAACC TGGACTGGTG CCGCAGGGTT
CAGGACGGCA GTTATCAGGG CGAACGACTG GGCTTTACCG AGCCTAAAGA CCTGATTGCC
TGA
|
|---|
| Protein sequence | MRILVTGGAG FIGSALIRHL INNTDHEVLN FDKLTYAGNL ESLQSIATDT RYEFVQADIC
DQARVSAVLE RFAPQAIMHL AAESHVDRSI DGPAEFIQTN IVGTYSLLEA TRAWWLKLPE
AQRQAFRFHH ISTDEVYGDL HGVDDLFTET TPYAPSSPYS ASKAASDHLV RAWHRTYGLP
VVVTNCSNNY GPFHFPEKLI PLVILNALAG KPLPVYGNGL QVRDWLYVED HARALLKVVT
EGEVGETYNI GGHNEQKNID VVRGICALLD ELAPQHPAGV AQYSDLITYV VDRPGHDQRY
AIDAGKIDKE LDWTPEETFE SGLRKTVQWY LDNLDWCRRV QDGSYQGERL GFTEPKDLIA
|
|---|
| |