| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4643 |
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| Symbol | |
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| ID | 3370193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5507043 |
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| End bp | 5508014 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637655013 |
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| Product | conjugal transfer protein |
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| Protein accession | YP_237711 |
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| Protein GI | 66047870 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.846302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTATCC TCACCACAGT CAGCAAACCA GCCTCATCGC TATACCCGGT CAGCACCTTG
ATACTCCTAA CAGCTATCGC AGTGCCGGTG ATCCTTGCAC TGATCGCGCT GAACATGCTT
CTGCTGCTCA TCTCGGCATG GTTGCTGGCC TACGCCGGGA TCTTCCTTCT AGGGTTTGGC
GGTAGCCAAT GGACCTCGGA TATAGCGATC AACTACTACA AAACTGTACT TGGCGTCGGC
ATCCAACTTT TCACCATGAC GTTTCTGATC GGTGTAGGAA AATCATTTTT GGACCAGTAC
TACCAGGCCT TTTCAGTTGG GACGCCTGAC CTGAATAGCC TATGCGTACT CCTGGTCGCA
TCCGTGGTAT TGCTCACTCT GGTCAACAAG CTACCCCCAA TGCTTGCCGG CATAATCAGC
TCTGGAGGGC AGACCTCAGG CATCGGTAGT TTCGGCGCTG GAGCTGCGAT AGGAGCAGCA
ACCATGGCTG CTTCTACCGT AGCTTCGGCA GCGAGCACCG CGCTGGGGGG AGCCAACGAG
ATAGCTGGAG GCACTTCGGC ACTCACGGCT GCCTTTAAAG CTGCTGAAGC CCACATGGAC
AGCGGCTCCA CTGACACAGG TAACTTTGAA TATGGCTCCG GCAGCGAGCA GCAAACAACG
AGTGGTTCGG GACAATCGGC TTTTGGGCAA GCCATGGGCA ATGGACAGAA CACAGGCTAC
GCTTCGAGGG TGGCCCAAAC TGGAAGGTTG GCAGCAAGTG CCGGGGCGCT GATCGCTGAA
CAAGTGGGCC AGAGCATAAG CAGTCGAGCC AGTGCAGCGG TATCAGATAC GGCGGGCGGC
AGGGTCGCGG TTTCGATCAA TGATAATAGC AAAACGTTAC ATTCCGACAA GACCGAGAGG
TTCGACGGTG ATAGTGTGAG CGGATCCGAT GAGTTTGCAG ATTTTATTGA TAGAGATCCT
ACTCCGGATT AA
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| Protein sequence | MSILTTVSKP ASSLYPVSTL ILLTAIAVPV ILALIALNML LLLISAWLLA YAGIFLLGFG
GSQWTSDIAI NYYKTVLGVG IQLFTMTFLI GVGKSFLDQY YQAFSVGTPD LNSLCVLLVA
SVVLLTLVNK LPPMLAGIIS SGGQTSGIGS FGAGAAIGAA TMAASTVASA ASTALGGANE
IAGGTSALTA AFKAAEAHMD SGSTDTGNFE YGSGSEQQTT SGSGQSAFGQ AMGNGQNTGY
ASRVAQTGRL AASAGALIAE QVGQSISSRA SAAVSDTAGG RVAVSINDNS KTLHSDKTER
FDGDSVSGSD EFADFIDRDP TPD
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