Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4362 |
Symbol | |
ID | 3369902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5215367 |
End bp | 5216395 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637654722 |
Product | rare lipoprotein A |
Protein accession | YP_237430 |
Protein GI | 66047589 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0440112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGCAT CGCCGATTCT TCAATCATTC AAGCTTCTGG CGCTGACCGG CCTGGCAGTG CTGGTTGCCA GTTGCTCGTC GCCGTCACGC ACAACGTCGT CGCAGCCGCC AAAAGGCGGT GCAGTCGTGC GCTCGATGCC GGGCCTGGAC ATCAACCGAG CCCACAAGGA CGGCGCGCCG TGGTGGGATG TGGATGTCTC GCGTATCCCT GACGCAACGC CGACCCTGCA CACCGGGGCC TACAAGGCCA ACCCGTACAC CGTGCTGGGC AAGACCTACT TCCCGATGAG CGATGCCAAG CGTTACGTCG CTTCGGGCAC CGCCTCCTGG TATGGCACCA AGTTTCATGG CCAGAACACT GCCAACGGCG AAGTGTATGA CCTGTACGGC ATGAGCGCCG CGCACAAGAC CCTGCCGCTG CCCAGCTACG TCAAAGTGAC CAACCTGGAC AACAATCGCA CGGTGATCCT GCGCGTCAAC GATCGCGGGC CGTTCTATTC CGACCGCATC ATCGACCTGT CCTACGCGGC CGCCAAAAAG CTCGGCTATG CCGAAAGCGG CACGGCTCGG GTCAAGGTCG AGGGTATCGA CCCGCAGGAA TGGTGGGCGC AACGGGGTCG TCCGGCGCCG CTGTTGCTCA ATCAGCCGCA GGTCGTTGCC CAGGCGACGC CGCCTGCGCT GTCCACCTCG ACCGGCACCG TCGAGCAGTA CACACCGCCG CCTCAGCAGC ACGCTGCACC CGTCGTGCCG ATGCAGGTTG ACGCAAAAAA AAACGCTTCA GGACAAGCCG CTGGGCTGTT TCTCCAGGTG GGAGCCTTCG CCAACCCGGA CGCTGCGGAA CTCCTGAGGT CGAAATTGAG CGGGATGGTT CGAGCGCCGG TGTTCGTCAG CTCGATAGCG CGCAATCAGC AAACACTCTA TCGAGTGCGG ATGGGACCGA TCGACACGCA GGGTGAAGCC CAGCAGCTGC AAAACAGCGT CAGGTCGGCC AATCTGGGTC AGCCGAGCGT AGTGACATCG GATCAGTAA
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Protein sequence | MRASPILQSF KLLALTGLAV LVASCSSPSR TTSSQPPKGG AVVRSMPGLD INRAHKDGAP WWDVDVSRIP DATPTLHTGA YKANPYTVLG KTYFPMSDAK RYVASGTASW YGTKFHGQNT ANGEVYDLYG MSAAHKTLPL PSYVKVTNLD NNRTVILRVN DRGPFYSDRI IDLSYAAAKK LGYAESGTAR VKVEGIDPQE WWAQRGRPAP LLLNQPQVVA QATPPALSTS TGTVEQYTPP PQQHAAPVVP MQVDAKKNAS GQAAGLFLQV GAFANPDAAE LLRSKLSGMV RAPVFVSSIA RNQQTLYRVR MGPIDTQGEA QQLQNSVRSA NLGQPSVVTS DQ
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