Gene Psyr_4362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4362 
Symbol 
ID3369902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5215367 
End bp5216395 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content63% 
IMG OID637654722 
Productrare lipoprotein A 
Protein accessionYP_237430 
Protein GI66047589 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0440112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCAT CGCCGATTCT TCAATCATTC AAGCTTCTGG CGCTGACCGG CCTGGCAGTG 
CTGGTTGCCA GTTGCTCGTC GCCGTCACGC ACAACGTCGT CGCAGCCGCC AAAAGGCGGT
GCAGTCGTGC GCTCGATGCC GGGCCTGGAC ATCAACCGAG CCCACAAGGA CGGCGCGCCG
TGGTGGGATG TGGATGTCTC GCGTATCCCT GACGCAACGC CGACCCTGCA CACCGGGGCC
TACAAGGCCA ACCCGTACAC CGTGCTGGGC AAGACCTACT TCCCGATGAG CGATGCCAAG
CGTTACGTCG CTTCGGGCAC CGCCTCCTGG TATGGCACCA AGTTTCATGG CCAGAACACT
GCCAACGGCG AAGTGTATGA CCTGTACGGC ATGAGCGCCG CGCACAAGAC CCTGCCGCTG
CCCAGCTACG TCAAAGTGAC CAACCTGGAC AACAATCGCA CGGTGATCCT GCGCGTCAAC
GATCGCGGGC CGTTCTATTC CGACCGCATC ATCGACCTGT CCTACGCGGC CGCCAAAAAG
CTCGGCTATG CCGAAAGCGG CACGGCTCGG GTCAAGGTCG AGGGTATCGA CCCGCAGGAA
TGGTGGGCGC AACGGGGTCG TCCGGCGCCG CTGTTGCTCA ATCAGCCGCA GGTCGTTGCC
CAGGCGACGC CGCCTGCGCT GTCCACCTCG ACCGGCACCG TCGAGCAGTA CACACCGCCG
CCTCAGCAGC ACGCTGCACC CGTCGTGCCG ATGCAGGTTG ACGCAAAAAA AAACGCTTCA
GGACAAGCCG CTGGGCTGTT TCTCCAGGTG GGAGCCTTCG CCAACCCGGA CGCTGCGGAA
CTCCTGAGGT CGAAATTGAG CGGGATGGTT CGAGCGCCGG TGTTCGTCAG CTCGATAGCG
CGCAATCAGC AAACACTCTA TCGAGTGCGG ATGGGACCGA TCGACACGCA GGGTGAAGCC
CAGCAGCTGC AAAACAGCGT CAGGTCGGCC AATCTGGGTC AGCCGAGCGT AGTGACATCG
GATCAGTAA
 
Protein sequence
MRASPILQSF KLLALTGLAV LVASCSSPSR TTSSQPPKGG AVVRSMPGLD INRAHKDGAP 
WWDVDVSRIP DATPTLHTGA YKANPYTVLG KTYFPMSDAK RYVASGTASW YGTKFHGQNT
ANGEVYDLYG MSAAHKTLPL PSYVKVTNLD NNRTVILRVN DRGPFYSDRI IDLSYAAAKK
LGYAESGTAR VKVEGIDPQE WWAQRGRPAP LLLNQPQVVA QATPPALSTS TGTVEQYTPP
PQQHAAPVVP MQVDAKKNAS GQAAGLFLQV GAFANPDAAE LLRSKLSGMV RAPVFVSSIA
RNQQTLYRVR MGPIDTQGEA QQLQNSVRSA NLGQPSVVTS DQ