Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4341 |
Symbol | thiE |
ID | 3369881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5194772 |
End bp | 5195389 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637654701 |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_237409 |
Protein GI | 66047568 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC GTGGCCTGTA TGCCATCACC GACAGCCAGT TGCTGTCCGG AAAATTTCTG TCGTACGTCG AAGCGGCGCT GGACGGCGGC GTGACGCTGC TGCAATACCG CGACAAGAAC AGTGACGAGT CCCGCCGCCT GCGCGAAGCG ACCGAACTGC TCAAGCTCTG CGAACGCTAC AAGACCCGGC TGATCATCAA CGATGACGCT GAACTGGCTG CGCGGCTGGG GGTGGGCGTG CATTTGGGAC AGTCCGACGG CTCGCTGCCC GATGCCCGCG CCCTGCTCGG GCACAAGGCG ATTGTCGGGG CTACTTGTCA TGGCCGCGTG GAATTGGCCG AGCAAGCCAA GGCTGACGGC GCGACGTACG TGGCATTTGG CAGGTTCTTC AACTCCCTGA CCAAACCCGG CGCCCCGGCC GTGCCGCTGG ACCTGATCGC TCAGGTGCGT GCCAGGGTCC ACCTGCCGAT TGCGGTGATT GGCGGCATTA CCCTGGAGAA CGCACCGCAA CTGGTCGAAC ACGGGGCCGA CCTGCTCGCC GTGGTGCACG GCCTGTTCGG CGCTGAAAAT ACTCAGGAAG TGACGCGCCG GGCGAAAGCT TTCACGGCGT TGTTGTAG
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Protein sequence | MKLRGLYAIT DSQLLSGKFL SYVEAALDGG VTLLQYRDKN SDESRRLREA TELLKLCERY KTRLIINDDA ELAARLGVGV HLGQSDGSLP DARALLGHKA IVGATCHGRV ELAEQAKADG ATYVAFGRFF NSLTKPGAPA VPLDLIAQVR ARVHLPIAVI GGITLENAPQ LVEHGADLLA VVHGLFGAEN TQEVTRRAKA FTALL
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