| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4300 |
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| Symbol | |
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| ID | 3369840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5126781 |
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| End bp | 5127395 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637654660 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_237368 |
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| Protein GI | 66047527 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0011109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.487257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTGGAAC GTATTGCAGT CATCGACTTT GAAACCACCG GCATCTCCCC GGGCCATAGC
TGCCGGGCGA CCGAGATTGC GGTGGTGATC ATGGAGCAGG GGCGTATCGT CGAGCGCTTT
CAGAGCCTGA TGAATGCCGG CGTGCGTATT CCTGCGTTCA TCGAAGGGTT GACCGGCATC
AGTAACAACA TGATTCGTAC CGCCCCCAGC GCCGAGCGGG TGATGGGCGA TGTGGCGGAT
TTCGTCGGTT CGACACCGCT GGTGGCGCAC AACGCCTCGT TCGACCAGAA GTTCTGGGAC
TACGAGCTGT CGCGTATCCA GCGCACGCGC GAACAGAGCT TCGCCTGTTC ACTGCTGCTG
GCCCGACGCC TGATGCCCGG CGCACCGAAC CACAAGCTCG GCACGTTGAC CCGCTATGCG
CGTCTGCCCG ACACCGGCAA GGCTCACCGG GCGATGGCCG ATGCGGAAAT GGCGGCCAAC
CTGACCGCGC ACCTGACCAA CGAATTGCGC CAGACCCACG GCATCTCTGC CATCTCCCAC
CAGATGCTGT GTTCCCTGCA GAAAGTCCCG GCCGCGAAGA TCAGTGAAAC CCTGAAGCGC
CAGCGCGGCG TCTGA
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| Protein sequence | MLERIAVIDF ETTGISPGHS CRATEIAVVI MEQGRIVERF QSLMNAGVRI PAFIEGLTGI
SNNMIRTAPS AERVMGDVAD FVGSTPLVAH NASFDQKFWD YELSRIQRTR EQSFACSLLL
ARRLMPGAPN HKLGTLTRYA RLPDTGKAHR AMADAEMAAN LTAHLTNELR QTHGISAISH
QMLCSLQKVP AAKISETLKR QRGV
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