Gene Psyr_4172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4172 
Symbol 
ID3369709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4962108 
End bp4963124 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content62% 
IMG OID637654530 
Producthypothetical protein 
Protein accessionYP_237240 
Protein GI66047399 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCT TGAATCAGGC GCTCAGCGTC GCCCTCGACA ATCGCCAGGC GTTGCTTGAC 
CAATTGCATG GACAGGGCAC GGACTGCTAT CGACTGTTTC ACGGCAGCCA GGAGGGTGCC
AGCGGGCTGA CCATCGACCG CTACGGCCCG CAATTGCTGG TGCAGAGCTT TCACACCCGC
CTGGATCGCG ATGCCCTGCT GGCGCTGCAT GAACAGGTCA ACACGCGCCT GGGCCTGGAC
ACCCTGCTGG TCTATAACGA TCGCTCGCAA GGCAACTCGC GCGTCGATCG CCACGACACC
GTGTACAAGG CTGAAGACGC GGCTCTGGCC GATCATGTCG GCCACGAATG GGGGCTCAAT
TACCGGGTCC GCGGTCGGCA TGCAGGCCAG GACCCGCTGT TGTTTCTGGA CCTGCGCAAC
ACCCGCGGCT GGGTCAAGCA GCACAGCGCC GGCAAAAGCG TGCTGAACCT GTTCGCCTAC
ACCTGCGGCG TCGGCCTGAG TGCGGCGGCC GGTGGCGCGA GTGAAGTGTG CAATCTCGAT
TTCGCCGAGG GCAATCTGGC GGTGGGTCGC GAGAATGGTG CGCTCAACCC GCAACTGCCA
CCCATGCAAT TCATCCAGTC GGATTATTTT CCGGCGATCC GCCAGTTGGC CGGGTTGCCC
ATTGCTGCGC GCCGCAGCCA GCAATTGCCC AGCTACGTGA AACTGCAACA GCGCCAATAT
GATCTGGTCC TGCTCGATCC ACCGGCCTGG GCCAAGAGTG CGTTCGGCAC CGTTGATTTG
CTGCGCGACT ATCAGAGCCT GCTCAAACCT GCACTGTTGA CCACAGCAGA CGATGGCGTG
CTGATCTGCT GCAACAATCT GGCGAAAGTC AGCATGCAGG ACTGGCGCGA GCAGGTGCTG
CGCTGCGCCA CCAAGGCCGG GCGTCCAGTG CGCGACTGCC AGGAAATGCG TCCCGCCGCA
GACTTCCCGT CTCAGGATAA TCAACCACCG CTGAAAACGC TGATTCTGCA ACTCTGA
 
Protein sequence
MSSLNQALSV ALDNRQALLD QLHGQGTDCY RLFHGSQEGA SGLTIDRYGP QLLVQSFHTR 
LDRDALLALH EQVNTRLGLD TLLVYNDRSQ GNSRVDRHDT VYKAEDAALA DHVGHEWGLN
YRVRGRHAGQ DPLLFLDLRN TRGWVKQHSA GKSVLNLFAY TCGVGLSAAA GGASEVCNLD
FAEGNLAVGR ENGALNPQLP PMQFIQSDYF PAIRQLAGLP IAARRSQQLP SYVKLQQRQY
DLVLLDPPAW AKSAFGTVDL LRDYQSLLKP ALLTTADDGV LICCNNLAKV SMQDWREQVL
RCATKAGRPV RDCQEMRPAA DFPSQDNQPP LKTLILQL