Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4172 |
Symbol | |
ID | 3369709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4962108 |
End bp | 4963124 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654530 |
Product | hypothetical protein |
Protein accession | YP_237240 |
Protein GI | 66047399 |
COG category | [R] General function prediction only |
COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTTCCT TGAATCAGGC GCTCAGCGTC GCCCTCGACA ATCGCCAGGC GTTGCTTGAC CAATTGCATG GACAGGGCAC GGACTGCTAT CGACTGTTTC ACGGCAGCCA GGAGGGTGCC AGCGGGCTGA CCATCGACCG CTACGGCCCG CAATTGCTGG TGCAGAGCTT TCACACCCGC CTGGATCGCG ATGCCCTGCT GGCGCTGCAT GAACAGGTCA ACACGCGCCT GGGCCTGGAC ACCCTGCTGG TCTATAACGA TCGCTCGCAA GGCAACTCGC GCGTCGATCG CCACGACACC GTGTACAAGG CTGAAGACGC GGCTCTGGCC GATCATGTCG GCCACGAATG GGGGCTCAAT TACCGGGTCC GCGGTCGGCA TGCAGGCCAG GACCCGCTGT TGTTTCTGGA CCTGCGCAAC ACCCGCGGCT GGGTCAAGCA GCACAGCGCC GGCAAAAGCG TGCTGAACCT GTTCGCCTAC ACCTGCGGCG TCGGCCTGAG TGCGGCGGCC GGTGGCGCGA GTGAAGTGTG CAATCTCGAT TTCGCCGAGG GCAATCTGGC GGTGGGTCGC GAGAATGGTG CGCTCAACCC GCAACTGCCA CCCATGCAAT TCATCCAGTC GGATTATTTT CCGGCGATCC GCCAGTTGGC CGGGTTGCCC ATTGCTGCGC GCCGCAGCCA GCAATTGCCC AGCTACGTGA AACTGCAACA GCGCCAATAT GATCTGGTCC TGCTCGATCC ACCGGCCTGG GCCAAGAGTG CGTTCGGCAC CGTTGATTTG CTGCGCGACT ATCAGAGCCT GCTCAAACCT GCACTGTTGA CCACAGCAGA CGATGGCGTG CTGATCTGCT GCAACAATCT GGCGAAAGTC AGCATGCAGG ACTGGCGCGA GCAGGTGCTG CGCTGCGCCA CCAAGGCCGG GCGTCCAGTG CGCGACTGCC AGGAAATGCG TCCCGCCGCA GACTTCCCGT CTCAGGATAA TCAACCACCG CTGAAAACGC TGATTCTGCA ACTCTGA
|
Protein sequence | MSSLNQALSV ALDNRQALLD QLHGQGTDCY RLFHGSQEGA SGLTIDRYGP QLLVQSFHTR LDRDALLALH EQVNTRLGLD TLLVYNDRSQ GNSRVDRHDT VYKAEDAALA DHVGHEWGLN YRVRGRHAGQ DPLLFLDLRN TRGWVKQHSA GKSVLNLFAY TCGVGLSAAA GGASEVCNLD FAEGNLAVGR ENGALNPQLP PMQFIQSDYF PAIRQLAGLP IAARRSQQLP SYVKLQQRQY DLVLLDPPAW AKSAFGTVDL LRDYQSLLKP ALLTTADDGV LICCNNLAKV SMQDWREQVL RCATKAGRPV RDCQEMRPAA DFPSQDNQPP LKTLILQL
|
| |