Gene Psyr_3857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3857 
Symbol 
ID3369392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4597749 
End bp4598213 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content59% 
IMG OID637654214 
Producthypothetical protein 
Protein accessionYP_236925 
Protein GI66047084 
COG category[S] Function unknown 
COG ID[COG5615] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.693572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.621208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTT TTTCTACTGT CTATACGTTG CATCTGCTGG CTGCCCTGGT GTGGGTTGGC 
GGCATGTTTT TCGCCTGGAT GGTGTTGCGC CCGGCAGTCA TTGCAGCACT TGAAGGCCCT
TCTCGCTTGA AAGTGTGGGT CCAGGTGTTT CCGCGCTTCT TTGCCTGGGT CTGGGCCGCG
GTGGTGCTGC TGCCGATAAC CGGCATCGGC ATGATTCACC TCAACTTCAC CGGCTTTGAA
ACCGCGCCGC GTTATGTGCA GATCATGATG GGCCTGTACG TCGTCATGGT TGCGCTGTTT
TTGCGTATCC AGTCATTGCA ACTGCCTGAG CTGCGTCGCG CCATGGAAGC CGAACAGTGG
GCCGAGGGCG CGGCAGCATT GGGCAATATC CGCCGCCTGG TCGGCATCAA CCTGATGATC
GGTCTGGCCG TGGTCATGCT CGCCGCTGCT CGTCCGGGCC TTTGA
 
Protein sequence
MTAFSTVYTL HLLAALVWVG GMFFAWMVLR PAVIAALEGP SRLKVWVQVF PRFFAWVWAA 
VVLLPITGIG MIHLNFTGFE TAPRYVQIMM GLYVVMVALF LRIQSLQLPE LRRAMEAEQW
AEGAAALGNI RRLVGINLMI GLAVVMLAAA RPGL