Gene Psyr_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3548 
Symbol 
ID3369075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4225354 
End bp4226055 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content58% 
IMG OID637653899 
Productglutathione S-transferase 
Protein accessionYP_236618 
Protein GI66046777 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0628604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.196168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCA AATTGCGACT TTTCACCTCT CCTTCGGCTT TTCCGAATCC TCAACGCCTG 
CGTTTGTTCA TCCACGAAAA AGGCATTGCC GATCAGTTCG ACGAAACCAT TTATGACATG
ACGCCGGGTG GAGAGCAGCG TGGCTGGCGT CACCTGAACA TGAACCCTTG GGGTGAAACA
CCGACCCTGG AACTGGCAGA CGGCAGCTTC ATTTCCGAGA CGGCCGCTAT CGCGCGTTAC
CTGGATCAGT CTTATCCGGG CCGCAAGATC ATGGGCGAGG GCGCCCTGGA GCAGGGCCTC
GATAACATGT GGGATAACCG CATCTGGGTG CATATCCTCT ATCGGATCGT TACGGCCTTT
CACGTGCTGC ACACCGGCCT CGGCTTCAAG CTTGAACTGA CCAAGAACGA AGCATGGGGC
GAGCACTGCC GCAAAGAGGC GCTGAGCCAT GCGGCATTGG TCAATCGTCA TCTGTCCGAT
GGCCGCGAGT GGCTGCTTGG CGGCGATGCG CCAACGTTCG CGGACATCAC GCTTGCAACC
GCCATTGCCT TCTCCAAGTT CCCGGTCAAC GCCACGCCAC TGGATGAGCG TTTCGAGTTC
CTGGATTTGT ACTGGCAGCG CTGGCAGAAG CGTCCGGCTT TCCAGGCCGC TTATGCTGAT
CGCAGCAGTG GAATTCCTGA GCTGGACTCG CCGGCCGAAT GA
 
Protein sequence
MTSKLRLFTS PSAFPNPQRL RLFIHEKGIA DQFDETIYDM TPGGEQRGWR HLNMNPWGET 
PTLELADGSF ISETAAIARY LDQSYPGRKI MGEGALEQGL DNMWDNRIWV HILYRIVTAF
HVLHTGLGFK LELTKNEAWG EHCRKEALSH AALVNRHLSD GREWLLGGDA PTFADITLAT
AIAFSKFPVN ATPLDERFEF LDLYWQRWQK RPAFQAAYAD RSSGIPELDS PAE