| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3148 |
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| Symbol | |
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| ID | 3368669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3773048 |
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| End bp | 3773482 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637653493 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_236218 |
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| Protein GI | 66046377 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.367938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAACGC CTGTCGCAAG CCGGGGTTTT ACCCTCATGG AAATGCTGGT GGTGCTGGTG
TTGATGAGCA TTGCCGTCGG TCTGGTGGGG TTCGGTCTGC AACAGGGTTT GAGCACCGCC
AGTGAACGGC GCGCGGTCGG TGACATGGTC GAAGCGCTAC GGGCCACCAG AGTGCGCGCG
ATTGTCACCG GTCAGCCGGC GCGCACCGAA TTCAATCTGC GCAAGGCGAC CTTCAAGGCG
CCCGGCAAGC GCGAGATGCA CTGGCCGGAA AGTCTGCGCG TGACCATGCA GACTGCGTCC
GATCTTGGCT CCGCTGTGGA GTTCTACCCG GACGGCGGCT CCAGTGGCGG CAACGTGGTG
GTCGCTGACG GCGACCGACG CTGGCGTATT GATATTGGCT GGCTGACCGG CAGCGTCCAG
GTCCGGACGC TTTAA
|
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| Protein sequence | MRTPVASRGF TLMEMLVVLV LMSIAVGLVG FGLQQGLSTA SERRAVGDMV EALRATRVRA
IVTGQPARTE FNLRKATFKA PGKREMHWPE SLRVTMQTAS DLGSAVEFYP DGGSSGGNVV
VADGDRRWRI DIGWLTGSVQ VRTL
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