Gene Psyr_3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3133 
Symbol 
ID3368654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3758448 
End bp3759293 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content62% 
IMG OID637653478 
Productamidohydrolase 2 
Protein accessionYP_236203 
Protein GI66046362 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.118734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATT CCTGTACCAC ACCAATGCTG GGCATCGATG CCCACGCACA TGTCTTCAGC 
AAGGATTTGA GTCTGGCGTC AGGACGACGT TACAGTCCGG ACTACGACGC GACGGTGCAC
GCCTATCTGG CCAATCTGAG CGAACATGGC TTGAGCCACG GCGTGTTGGT CCAGCCCAGT
TTTCTGGGCA CTGACAACCG GTTTCTGCTC GACGCCCTGG CGCAGGCTCC GGACCGCTTG
CGCGGCGTGG CCGTGGTCGA CACGGACATC AGTCGCGGCG TGTTGCAGCG TATGGCCGGG
CTGGGCATCG TCGGCATCCG CTTGAACCTG ATCGGCAAGC CGCTGCCGGA CTTCTCCGCG
TCGGAATGGA AAACGCTGTT CAAACACATC TGGACGCTCG GCTGGCATGT CGAACTGCAC
CGCGAGGTCG CTGACCTGCC AGGGCTGATC CGGCAGTTGC TGCCGTTCGG TTGCAAGCTG
GTGATTGACC ATTTCGGGCG GCCCGATGCG CGTCCTGGTG TTGCTGATCC GGCCTTCCAG
GCCTTGCTGG AGTTGGGCCT GAGCGGGCAG TTGTGGATGA AGGTTTCGGC AATCTACCGT
CTGGGCGGCA GTGTCGAGCA GAACGCGGCG TTCGCTCGCG CGGCATTGCC GTTGCTGCTG
CAAAGCTTTG GTCCGCGCCG GCTGGTATGG GGCAGCGACT GGCCACACAC CCAGCATGAG
CACGTGGTCA GCTACACCGA TGTGGTCGAG CAGTTCCGCG CGCTCGACTG CCCGGACCCG
CTCAGGCGAA TTATGTTGGT CGAGGCTCCG CAGGCACTGT TCGATTTCCT GCCGGTGGAA
ATCTGA
 
Protein sequence
MIDSCTTPML GIDAHAHVFS KDLSLASGRR YSPDYDATVH AYLANLSEHG LSHGVLVQPS 
FLGTDNRFLL DALAQAPDRL RGVAVVDTDI SRGVLQRMAG LGIVGIRLNL IGKPLPDFSA
SEWKTLFKHI WTLGWHVELH REVADLPGLI RQLLPFGCKL VIDHFGRPDA RPGVADPAFQ
ALLELGLSGQ LWMKVSAIYR LGGSVEQNAA FARAALPLLL QSFGPRRLVW GSDWPHTQHE
HVVSYTDVVE QFRALDCPDP LRRIMLVEAP QALFDFLPVE I