Gene Psyr_2702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2702 
Symbol 
ID3368219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3282649 
End bp3283830 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content55% 
IMG OID637653050 
ProductUDP-galactopyranose mutase 
Protein accessionYP_235779 
Protein GI66045938 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0562] UDP-galactopyranose mutase 
TIGRFAM ID[TIGR00031] UDP-galactopyranose mutase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.601095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0699705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGGA TAAATCTTGA ATCAGCCGCG CGTGAAAAGA CGCCCTATGA CTTTCTGATC 
GTCGGTGCAG GTTTTGCAGG CAGTGTGTTG GCGGAAAGGC TGGCGGCGGG ATCGAGCAAG
CGCGTTTTGT TGATCGACCG ACGTCCACAT ATCGCGGGTA ACGCTTACGA TCACCTGGAC
AGTGCCGGGG TGTTGGTTCA TCAATACGGG CCCCATATAT TCCACACCAA CGCTGAGCGG
ATTGTGGAAT ACCTTTCACG ATTTACCGAA TGGCGCGATT ACGAACACCG TGTGCTCGCC
AGCGTAGACA AACAACTGCT GCCTGTTCCG ATCAACCTCG ATACGCTCAA CAGCCTGTAC
GGCTTGCAGA TGAATGAACA AGAAGCCGAA GCGTTTCTTG CCAGCCGCGC CGAGCCTGTC
GAGACGATAA GAACCTCCGA AGACGTTGTG ATCAGTCAGA TTGGTCGGGA GCTGTACAAG
AAGTTTTTCC GTGGCTATAC CCGCAAACAA TGGGGGCTGG ACCCTTCGCA ACTGGACCGG
TCGGTCACCG CCCGAGTACC TACCCGTACC AACTCGGACA GTCGTTACTT CACGGACACT
TTTCAGAAAA TGCCGCTGCA TGGCTACACG CACATGTTTG AACAGATACT CAACCACCCG
CTTATCGATA CCGTACTGGG GGTCGATTTT GCCGATGTGC GCAAGGCGGT GAAGTATTCG
CATTTGATCT ATTGCGGGCC GATCGATGAA TACTTCGGTT ATTGCTACGG CCGTCTTCCG
TATCGGTCGT TGCGTTTCGA GCACAAGACC GTTGATCAGG CGCAGTTTCA ATCGGTGGCG
GTGATCAACT ACCCGGATGA GGCAGTCCCT CATACGCGCA TCACCGAATA CAAGCACCTT
ACCGGTCAAC AGCACGCCAG AACCAGTCTC AGCTACGAGT TTCCAAGTGC CGAGGGCGAC
CCTTATTACC CCATTCCCCG ACCCGAAAAT GCCGAGTTGT ACAAGCGTTA CAAAGCATTG
GCCGATCAGT CGGATGAAGT CACTTTCCTT GGGCGACTGG GCACCTACAA GTATTACAAC
ATGGACCAGG TCGTGGGCCA GGCGTTGGCG TTGTACCAGC GGCTGGCCCA TGACTTCCCT
GAGCAACCTC CCGAACCGAT TGAACAGCCT GCGCGAGGTT GA
 
Protein sequence
MPRINLESAA REKTPYDFLI VGAGFAGSVL AERLAAGSSK RVLLIDRRPH IAGNAYDHLD 
SAGVLVHQYG PHIFHTNAER IVEYLSRFTE WRDYEHRVLA SVDKQLLPVP INLDTLNSLY
GLQMNEQEAE AFLASRAEPV ETIRTSEDVV ISQIGRELYK KFFRGYTRKQ WGLDPSQLDR
SVTARVPTRT NSDSRYFTDT FQKMPLHGYT HMFEQILNHP LIDTVLGVDF ADVRKAVKYS
HLIYCGPIDE YFGYCYGRLP YRSLRFEHKT VDQAQFQSVA VINYPDEAVP HTRITEYKHL
TGQQHARTSL SYEFPSAEGD PYYPIPRPEN AELYKRYKAL ADQSDEVTFL GRLGTYKYYN
MDQVVGQALA LYQRLAHDFP EQPPEPIEQP ARG