| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2556 |
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| Symbol | dcd |
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| ID | 3368073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2969153 |
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| End bp | 2969827 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637652904 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_235633 |
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| Protein GI | 66045792 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0711505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATATTGA CCGGTAGTGA AATCGAAAAT CGCGTGCGTT CGGGTGAAAT CGTCATCAGT
CCGTTTTCCC ATGAGAACGT CAACCCCAAC AGCTACAACT TCCGCCTGCA TGACCAGATG
AAGGTCTACG AAGACGATGT GATCGATGTG CGCGCCGAGG CGTCGACGCG AACCATCGAG
ATCGGTCCGG AAGGCTTTGA ATTGCAGCCC ATGAAGCTGT ATCTGGCCTC GACCATAGAA
ACCATGGGCA GCACCCATTT CGTACCTACC TATGCGGCTC GCTCTTCGAT CGCCAGGCTG
GGCATGTTCA TCAACCTCTC GGCGCCACTG GGCGACATCG GTTTCGTCGG GCGCTGGACC
TTGCAGCTGT ATGCGCTCAA CCGCATACGG GTTTACCCCG GCATGAACAT CGGTCAAATG
ATGTTCTGGA ACGTCAAGGG CGATATCGAG CTGTATTCCG GAAAGTACCA GGGCGCGACC
GAGGCTTTCG CGTCCCGCAT CTTCATGGAT TTCGAAAAGA CGCCGCGTCC ACAGCCGCTG
GTGCCCAACC TTGCGCCATT TCCCGTTGTA GCAGCCCAGG AAGAGGTCGA TGCCTCGCCC
GATGCGCTGG CCGCCAGGCA CGGGCGAATG GCCACCGAGA TTCCACTGAT AGCAGGAGGC
CGTCGTGTCC AGTAA
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| Protein sequence | MILTGSEIEN RVRSGEIVIS PFSHENVNPN SYNFRLHDQM KVYEDDVIDV RAEASTRTIE
IGPEGFELQP MKLYLASTIE TMGSTHFVPT YAARSSIARL GMFINLSAPL GDIGFVGRWT
LQLYALNRIR VYPGMNIGQM MFWNVKGDIE LYSGKYQGAT EAFASRIFMD FEKTPRPQPL
VPNLAPFPVV AAQEEVDASP DALAARHGRM ATEIPLIAGG RRVQ
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