Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2542 |
Symbol | |
ID | 3368059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2957409 |
End bp | 2958974 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652890 |
Product | extracellular solute-binding protein |
Protein accession | YP_235619 |
Protein GI | 66045778 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0150221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAC TCGTTCGTTC ATTGCTGGCG TCGGCCCTCT TGCTGGCCGC CGGCGGTGTC ACGGCACAGG ACTTGCGCAT CGGTTACGCC GACCCGGTCT CGTCCCTCGA CCCACAGCTG AACAATTATG CAGGCGACCG CTCGGTAGCG CTGCATGCCT TCGAATCGCT GGTCAGCCGC CGTGACGACA AGACCCTGCC AGGTCTGGCC AAGAGCTGGA AGGTGGTGGA TGACACCACC TGGGAGTTCG CCCTGCGTGA TGACGTCAAA TGGCAGGATG GCACGCCGCT GACCGCTGAT GACCTGGTCT TCTCCTTCGA GCGCGCGCGA AACGTGCCCG GCAGCGTGGC CTCGTATGCA GGTGCCATGC GTACCGTTGA ATCGATCAAG GCCAGGGATG ATCACACGCT GATCATCAAG ACCCGTTCGC CCAATGCCAA TCTGCTGCCG GACATCGATT CGATCTATAT CGTCAGTCGC CATGCCGGTG CGGCAGCCAG CAGCGCCGAT TACAACTCGG GCAAGGCGAT GATCGGCACC GGGCCTTACC GGTTTGTCTC GTTCGTGCCG GGCGATCGCA CGATATTCGC TCGCAACGAC AATTACTGGG GTGGAAAACC GACCTGGGAC AAGGTTGATT TCCGTTTCAT CGCCAACGCC GCCAACCGTA CCGCGGCCTT GCTGGCAGGC GATGTCGACG TGATCGACAA GGTATCGCCT ACCGATGTGG CGCGCCTGCG CAAAACGCCG AACGTCAATG TCTTCGCCTA TCAAGGGCTG CGTGCGCTGA TCATTCAGCC GAGTTTCCGT GCCGGTCCGA ACGAATTCAT TCGCGACAAC GCGGGCAAGC CGCTGGCCGA AAACCCGCTG CTGGATGTAC GCGTGCGCAA GGCGCTGTCC CTGGCGATCA ATCGTCCGGC CATCAACGAG CGCATCATGC AAGGCACCGT CACCGAAGCC AATCAATGGA TGCCGGCCAA CACGTTCGGT TACAACCCGC AGATCAAGAA CATCCCTTAT GACCTCAAGC AGGCCAAGGA CCTGCTGGCG CAGGCAGGTT TCCCCGAAGG CTTCCAATTG ACTGTGCATG TGCCGGGCGA CCGTTATCCG CAGGCACCGG AGGTCATGCA GGCGGTGGCG CAGTTCTGGA CGCGGATTGG CGTCAAGGTT CAGCTTGAGG TATTGCCGTG GGCGGTGTAT GCGGGCAAGG CGAACAAGAA TGAACTGGCG ATCAGCGTGA TTGCCTGGGG CAATGGCACC GGCGAAGCGG CCTATGCCCT GACCAATATT CTGACCACGG TCGACAGCAG CAAAGGGCAG GGCGCTTCGA ACTGGGGCCA TTACAGCAAT CCGCTGGTGG ACAAGGCCCT GGCTGATTCG ACCGCTGAAT TCGACGAGGC CAGGCGGCGC AAGATTCTCC AGGACTCGGT GCAGATTGTC AGCGATGACG TCGGCATCAT CCCGCTGTTC CATTACCAGA ACATCTGGGC AGCGCGCAAA GGCCTCAAGG TCGAGCCACT GGTCAGCGAC CGCACTGCAG CGACCATGGT CACCGAGCAG CCTTGA
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Protein sequence | MKPLVRSLLA SALLLAAGGV TAQDLRIGYA DPVSSLDPQL NNYAGDRSVA LHAFESLVSR RDDKTLPGLA KSWKVVDDTT WEFALRDDVK WQDGTPLTAD DLVFSFERAR NVPGSVASYA GAMRTVESIK ARDDHTLIIK TRSPNANLLP DIDSIYIVSR HAGAAASSAD YNSGKAMIGT GPYRFVSFVP GDRTIFARND NYWGGKPTWD KVDFRFIANA ANRTAALLAG DVDVIDKVSP TDVARLRKTP NVNVFAYQGL RALIIQPSFR AGPNEFIRDN AGKPLAENPL LDVRVRKALS LAINRPAINE RIMQGTVTEA NQWMPANTFG YNPQIKNIPY DLKQAKDLLA QAGFPEGFQL TVHVPGDRYP QAPEVMQAVA QFWTRIGVKV QLEVLPWAVY AGKANKNELA ISVIAWGNGT GEAAYALTNI LTTVDSSKGQ GASNWGHYSN PLVDKALADS TAEFDEARRR KILQDSVQIV SDDVGIIPLF HYQNIWAARK GLKVEPLVSD RTAATMVTEQ P
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