Gene Psyr_2525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2525 
Symbol 
ID3368042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2935664 
End bp2936593 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content56% 
IMG OID637652873 
ProductMg2+ transporter protein, CorA-like 
Protein accessionYP_235602 
Protein GI66045761 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0224722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.599163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAGG GCCTGAAACT CGACAACAAC CAGTTGCTGG CATGTGATCC GCAAAAGGCC 
CAGGTGCTGT GGTTCAGCAA ACCGGATGCC GGAGAACGCA GATTATTGCT GGAGCGATTT
CACCTTGATG AGCACGCTGT TGCCTCGGCA CTCGACCCGG ACGAAATTTC GCGCATCGAG
TTTCACCCTG ATGCATTGTT CGTCATCTGG AAACGCCCCG AGAACTATTC GGGCAAGGAC
AGCTTCTCGT TCGACGTTTC GTCCTTTGGC GTGCTGCTGA GCCGGGACCA GCTGGTGCTG
ATCTGTGATG ACGAGCAACC CTTGAGCGCA CTAGGGGCTC ACCGTCCGTT GAACCAGCCG
CTGGATATCC TTCTGGAGCT GCTGTTCAAC AACATTCATC ACTACTTGGG GCACTTGAAA
GTCATCAAGA TGGTCGCCCG TGAATTGCAG CAGAAATTCA ACTCTTCACT GGAAAACCGC
CATCTGCTGC AGATGTTCAA CCTCAGCGAA AGTCTGGTGT ATTACATCAA CGCCATCCAC
AGCAACGGTG CGGTCCTGAC GCGTCTGCGC AATCATGCGC AAGCCAGGCA ATACCCAGCA
GAAAGCCTGG CGCTGATCGA CGACATGATC ATCGAGAACG ATCAGTGCTA CAAACAGGCG
GAGATCTATT CCACGGTGTT CGCCGGTCTG ATGGATGCGC GCGGCAACCT GGTCAATAAC
AGCACCAACA CCCTGCTGCG CAAACTGACC TTGATCAATG TGGTGTTTCT GCCATTGAAC
CTGATTGCCG GGATCGGCGG CATGTCGGAA TTCAGCATGA TGACCGCCCC ACTGCACTGG
TGGGTGGCTT ACCCGGCACT GCTGCTGGCC ATGCTCGGGA TGGGGGCGGT GATGGTCTGG
GGACTGCGCA GAATGGCGCG CGCAGCCTGA
 
Protein sequence
MIQGLKLDNN QLLACDPQKA QVLWFSKPDA GERRLLLERF HLDEHAVASA LDPDEISRIE 
FHPDALFVIW KRPENYSGKD SFSFDVSSFG VLLSRDQLVL ICDDEQPLSA LGAHRPLNQP
LDILLELLFN NIHHYLGHLK VIKMVARELQ QKFNSSLENR HLLQMFNLSE SLVYYINAIH
SNGAVLTRLR NHAQARQYPA ESLALIDDMI IENDQCYKQA EIYSTVFAGL MDARGNLVNN
STNTLLRKLT LINVVFLPLN LIAGIGGMSE FSMMTAPLHW WVAYPALLLA MLGMGAVMVW
GLRRMARAA