Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2503 |
Symbol | |
ID | 3368020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2913035 |
End bp | 2913886 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637652851 |
Product | extracellular solute-binding protein |
Protein accession | YP_235580 |
Protein GI | 66045739 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.321301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATCGCG GACCTTCCTT TGTGAAAGCT TGTGCCTTTG TTCTTTCAGC CTCATTCATG CTGGCCAATA CGGTGCAGGC AGCCGAAGGC AGCAAGCTGG ATGCAGTATT GAAACGTGGC AATCTGGTGG TAGGGACGGG CAGTACCAAT GCTCCGTGGC ACTTCCAGGG CGCAGACGGC AAGTTGCAGG GCTTCGATAT CGACATTGGC AGAATCATCG CCAAGGGCCT GTTCAATGAT CCGAGCAAGG TGGAGTTTGT CGTGCAGTCC TCGGATGCAC GTATTCCCAA CCTGCTGACC GACAAGGTCG ACATCAGCTG CCAGTTCATC ACCGTTACTG CCAGTCGCGC GCAGCAGGTG GCATTCACCC TGCCGTACTA CCGCGAGGGT GTGGCGCTGC TGTTGCCTGC CAATAGCAAG TACAAGGAAA TCGATGACCT GAAGGCGGCA GGTGACGATG TGACCGTGGC CGTACTGCAA AACGTGTATG CCGAGGAACT GGTGCATCAG GCACTGCCCA AGGCCAAGGT CGATCAGTAC GACAGCGTCG ACCTGATGTA CCAGGCGATC AACTCCGGGC GTGCCGATAC AGCGGCCACC GATCAGTCTT CGGTCAAGTA CCTGATGGTG CAGAACCCTG GCCGCTACCG TTCGCCGGCC TTTGCCTGGA GCCCGCAAAC CTATGCCTGC GCGGTCAAGC GTGGCGATCA GGACTGGCTG AACTTCGTCA ACACCGCGTT GCATGAGGCT ATGACCGGTG TCGAGTTCCC GGCTTACGCG GCGTCTTTCA AGCAATGGTT CGGTGTCGAT CTGCCGGTGC CTGCAATCGG TTTTCCGATG GAATACAAAT AA
|
Protein sequence | MHRGPSFVKA CAFVLSASFM LANTVQAAEG SKLDAVLKRG NLVVGTGSTN APWHFQGADG KLQGFDIDIG RIIAKGLFND PSKVEFVVQS SDARIPNLLT DKVDISCQFI TVTASRAQQV AFTLPYYREG VALLLPANSK YKEIDDLKAA GDDVTVAVLQ NVYAEELVHQ ALPKAKVDQY DSVDLMYQAI NSGRADTAAT DQSSVKYLMV QNPGRYRSPA FAWSPQTYAC AVKRGDQDWL NFVNTALHEA MTGVEFPAYA ASFKQWFGVD LPVPAIGFPM EYK
|
| |