Gene Psyr_2503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2503 
Symbol 
ID3368020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2913035 
End bp2913886 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content57% 
IMG OID637652851 
Productextracellular solute-binding protein 
Protein accessionYP_235580 
Protein GI66045739 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.321301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGCG GACCTTCCTT TGTGAAAGCT TGTGCCTTTG TTCTTTCAGC CTCATTCATG 
CTGGCCAATA CGGTGCAGGC AGCCGAAGGC AGCAAGCTGG ATGCAGTATT GAAACGTGGC
AATCTGGTGG TAGGGACGGG CAGTACCAAT GCTCCGTGGC ACTTCCAGGG CGCAGACGGC
AAGTTGCAGG GCTTCGATAT CGACATTGGC AGAATCATCG CCAAGGGCCT GTTCAATGAT
CCGAGCAAGG TGGAGTTTGT CGTGCAGTCC TCGGATGCAC GTATTCCCAA CCTGCTGACC
GACAAGGTCG ACATCAGCTG CCAGTTCATC ACCGTTACTG CCAGTCGCGC GCAGCAGGTG
GCATTCACCC TGCCGTACTA CCGCGAGGGT GTGGCGCTGC TGTTGCCTGC CAATAGCAAG
TACAAGGAAA TCGATGACCT GAAGGCGGCA GGTGACGATG TGACCGTGGC CGTACTGCAA
AACGTGTATG CCGAGGAACT GGTGCATCAG GCACTGCCCA AGGCCAAGGT CGATCAGTAC
GACAGCGTCG ACCTGATGTA CCAGGCGATC AACTCCGGGC GTGCCGATAC AGCGGCCACC
GATCAGTCTT CGGTCAAGTA CCTGATGGTG CAGAACCCTG GCCGCTACCG TTCGCCGGCC
TTTGCCTGGA GCCCGCAAAC CTATGCCTGC GCGGTCAAGC GTGGCGATCA GGACTGGCTG
AACTTCGTCA ACACCGCGTT GCATGAGGCT ATGACCGGTG TCGAGTTCCC GGCTTACGCG
GCGTCTTTCA AGCAATGGTT CGGTGTCGAT CTGCCGGTGC CTGCAATCGG TTTTCCGATG
GAATACAAAT AA
 
Protein sequence
MHRGPSFVKA CAFVLSASFM LANTVQAAEG SKLDAVLKRG NLVVGTGSTN APWHFQGADG 
KLQGFDIDIG RIIAKGLFND PSKVEFVVQS SDARIPNLLT DKVDISCQFI TVTASRAQQV
AFTLPYYREG VALLLPANSK YKEIDDLKAA GDDVTVAVLQ NVYAEELVHQ ALPKAKVDQY
DSVDLMYQAI NSGRADTAAT DQSSVKYLMV QNPGRYRSPA FAWSPQTYAC AVKRGDQDWL
NFVNTALHEA MTGVEFPAYA ASFKQWFGVD LPVPAIGFPM EYK