Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2260 |
Symbol | |
ID | 3367775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2624092 |
End bp | 2625615 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637652610 |
Product | amidase |
Protein accession | YP_235341 |
Protein GI | 66045500 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.172416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.824676 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACT CGTCCGAGCT GCTCGGTAAA TCCGCCACCG AACTGCGTGC GCTGATCGGC AACAAACAGC TCTCTCCGGT GGAGTTGCTG GACGCCTGTA TCGAGCGGAT TGAAAGCCTG AACCCGAAGA TCAATGCCTT CGCCGCAACC TGTTTCGAGC GCGCCCGCGA CGAGGCACTG CTGGCCGAAC AGGACGTTAT GCAAGGCAAG CCGCTGGGGC TGCTGCATGG CCTGCCAATC GGCATCAAGG ACCTGGAAGA AACCGCCGGG GTCCTCACCA CCTACGGCTC GCAACTGTTT CGCGACAACA TTCCCGCGCA GGACAACCTG TTCGTCGCGC GCCTGCGTGC GGCCGGGGCA ATAATGGTCG GCAAGACCAA TGTTCCGGAG CTGGGCGCAG GCGCCAATAC CCGCAATGTG GTGTGGGGCG CGACCGGTAA CCCGTTCAAT CCCGAGCTGA ATGCCGGCGG TTCCTCGGGC GGATCAGCCG CCGCACTGGC CGTGGACATG GTGCCGTTGT GCAGCGGCTC GGACACCGGC GGTTCGCTGC GCATTCCCGC GGCGCTGTGC GGTATCGTCG GCCTGCGTCC TTCGCCCGGG CTGGTGCCGA GTGAGCGCAA AAAGCTCGGC TGGACACCGA TTTCAGTGGT AGGCCCCATG GGCCGCAATG TTGCCGATAC CCTGCTGCAA CTGCGCGCCA GCGCCGGGTT GGGGCAGTCC GACCCGTTGA GTTATACCAT CGCCGCCGAC GAGTTCGCAC CGCGCCCGAT CGACCTCAGC CAGTTGCGCG TCGGCTACAG CGAAGACTTC GGCGCGTGTG CTGTGGATGA CAGAATCCGT GCCGTCTTTC GGGAAAAGAT CAGCGCCCTG AAATCGCTGT TCAAGTCCTG CGAAGCCATC GACCTGAACC TGACCAGCGC CCATCGCACC TTCGACGTCC TGCGTGCCGA AGCCTTCGTC GCCGGGCTGC AGGACGCTCA CGACTGCGAT CCTGATGCAC TGGGGCCCAA CACCCGCGCC AATTTCGACA TGGGTGCCGC GATGTCTTTG CAGGACTGCG TCAAGGCGCA TGGCGAGCAA AGCCGGATCT TTCGCGGTTT TCAGAAACAA TTCGAGGAAT ACGACCTGAT CCTCGCGCCC ACTACGCCAG TCTCGCCCTT CCCCTGGAGC GAGCTGTACC TGCGCGAAGT CAACGGCGTG CCCCTGGACA ATTACTACCG CTGGCTGGCG CTGTGCTACA CCATCACCCT GACCACCAAC CCGGCGCTGT CCCTGCCCTG CGGCACCGAC CACAACGGCA TGCCGTTCGG GCTGCAGGTG ATCGGCGGAT TTCGTGGCGA TGCGAAACTG CTGGCCTGCG CTGCAGCGAT CGAGCAGGCA ACACTGAATG ATCCACGCCT GTCACGTCCG CGTCCCGACC TGCAGAAACT GCTGGCCTCG GCGGTCGACC TGACCCACAT CGTCACGCAT CCGCCGATTT ATGGCGGGTC GAGAACGGGC AAGCCGGAGA TCGGGGCGAT GTGA
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Protein sequence | MQNSSELLGK SATELRALIG NKQLSPVELL DACIERIESL NPKINAFAAT CFERARDEAL LAEQDVMQGK PLGLLHGLPI GIKDLEETAG VLTTYGSQLF RDNIPAQDNL FVARLRAAGA IMVGKTNVPE LGAGANTRNV VWGATGNPFN PELNAGGSSG GSAAALAVDM VPLCSGSDTG GSLRIPAALC GIVGLRPSPG LVPSERKKLG WTPISVVGPM GRNVADTLLQ LRASAGLGQS DPLSYTIAAD EFAPRPIDLS QLRVGYSEDF GACAVDDRIR AVFREKISAL KSLFKSCEAI DLNLTSAHRT FDVLRAEAFV AGLQDAHDCD PDALGPNTRA NFDMGAAMSL QDCVKAHGEQ SRIFRGFQKQ FEEYDLILAP TTPVSPFPWS ELYLREVNGV PLDNYYRWLA LCYTITLTTN PALSLPCGTD HNGMPFGLQV IGGFRGDAKL LACAAAIEQA TLNDPRLSRP RPDLQKLLAS AVDLTHIVTH PPIYGGSRTG KPEIGAM
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