Gene Psyr_2183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2183 
Symbol 
ID3367698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2537453 
End bp2538175 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content62% 
IMG OID637652533 
Producttranscriptional regulator GntR 
Protein accessionYP_235264 
Protein GI66045423 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.484217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACC GTCCCATCCT CCTGCCGCCC ATGCGCCAGG TCTCTCGCGA TACCCTCCAG 
GACCAGGTCT ACCGACAGAT TCGTGAAGCA CTGATGAGCG GGCGCTTTCA GCCGGGTCAG
AAGCTGACGA TCCGTGGTCT GGCCGAGGCG CTGGGTTCCA GTCCGATGCC GGTGCGCGAG
GCGTTGAATC GTCTTAGCGC CGAGAACGCC TTCGAAGTCA CCGAAACCGC CCGGCTGCGT
GTGCCCATGA TAACCCCGGA GCGGTTGCGC GAGATTCGCG ACGCGCGGGT GGCGCTGGAA
GGTCTGTTGG CCGAGAAAGC CGTGGTTCTG ATCAACGACG CCGATCTTGA AGACATCAGC
CAGCTCTGCG GGCAGATGCA GAAGGCTGCC GACAGCGTTG ATGTCGCGCT CTATCTGTGG
ACCAACTTTG CCTTTCACCG GCGCATTTAC GCGGTGGCCA AGGCTGAGCT GATCGTTGCG
GCAGTAGAGA ACTTCTGGCT GCACATCGGC CCGTGTTTCG CGCTGGTTGC GCCTGACCGG
GCGCACCTTC AGCGTTCGAT GGAAGCACAC AACCGTATCG TCGAGGCTTT GGCGGCGCGT
GATGGGGCGG CGGCTCGTGC AGCTGTCACC GACGACATCA TGCAGGCTGC CGACTCTCTG
ACGCGCCTGA TCGCAAAGAG CGACCGCTCC AGGTCGCGTG TCTCGGGAGT GAAAAAAGCA
TGA
 
Protein sequence
MTDRPILLPP MRQVSRDTLQ DQVYRQIREA LMSGRFQPGQ KLTIRGLAEA LGSSPMPVRE 
ALNRLSAENA FEVTETARLR VPMITPERLR EIRDARVALE GLLAEKAVVL INDADLEDIS
QLCGQMQKAA DSVDVALYLW TNFAFHRRIY AVAKAELIVA AVENFWLHIG PCFALVAPDR
AHLQRSMEAH NRIVEALAAR DGAAARAAVT DDIMQAADSL TRLIAKSDRS RSRVSGVKKA