Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2183 |
Symbol | |
ID | 3367698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2537453 |
End bp | 2538175 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652533 |
Product | transcriptional regulator GntR |
Protein accession | YP_235264 |
Protein GI | 66045423 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.484217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGACC GTCCCATCCT CCTGCCGCCC ATGCGCCAGG TCTCTCGCGA TACCCTCCAG GACCAGGTCT ACCGACAGAT TCGTGAAGCA CTGATGAGCG GGCGCTTTCA GCCGGGTCAG AAGCTGACGA TCCGTGGTCT GGCCGAGGCG CTGGGTTCCA GTCCGATGCC GGTGCGCGAG GCGTTGAATC GTCTTAGCGC CGAGAACGCC TTCGAAGTCA CCGAAACCGC CCGGCTGCGT GTGCCCATGA TAACCCCGGA GCGGTTGCGC GAGATTCGCG ACGCGCGGGT GGCGCTGGAA GGTCTGTTGG CCGAGAAAGC CGTGGTTCTG ATCAACGACG CCGATCTTGA AGACATCAGC CAGCTCTGCG GGCAGATGCA GAAGGCTGCC GACAGCGTTG ATGTCGCGCT CTATCTGTGG ACCAACTTTG CCTTTCACCG GCGCATTTAC GCGGTGGCCA AGGCTGAGCT GATCGTTGCG GCAGTAGAGA ACTTCTGGCT GCACATCGGC CCGTGTTTCG CGCTGGTTGC GCCTGACCGG GCGCACCTTC AGCGTTCGAT GGAAGCACAC AACCGTATCG TCGAGGCTTT GGCGGCGCGT GATGGGGCGG CGGCTCGTGC AGCTGTCACC GACGACATCA TGCAGGCTGC CGACTCTCTG ACGCGCCTGA TCGCAAAGAG CGACCGCTCC AGGTCGCGTG TCTCGGGAGT GAAAAAAGCA TGA
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Protein sequence | MTDRPILLPP MRQVSRDTLQ DQVYRQIREA LMSGRFQPGQ KLTIRGLAEA LGSSPMPVRE ALNRLSAENA FEVTETARLR VPMITPERLR EIRDARVALE GLLAEKAVVL INDADLEDIS QLCGQMQKAA DSVDVALYLW TNFAFHRRIY AVAKAELIVA AVENFWLHIG PCFALVAPDR AHLQRSMEAH NRIVEALAAR DGAAARAAVT DDIMQAADSL TRLIAKSDRS RSRVSGVKKA
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