| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2034 |
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| Symbol | |
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| ID | 3367548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2359849 |
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| End bp | 2362047 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652383 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_235115 |
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| Protein GI | 66045274 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.449525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTC CATTCGTGCT GCGTCCGCTT TCATGGACAT TGAAAACCGT TATTTTTCTC
TCTCCCTTGC TGCCTGGCAG TCATGCCTTT GCGCAAATAC TTGTCAATGC GCCGCAGACC
ATCGATGCAA CAGGCCCGCT GGACAGTTAT CGGGTTGTCA GCACCGGAAA TCTGACAGCC
AACGGCGCGA CTACCCTGCA AATATCCACG ATCACCGGCG CGAAGCTGAC GCTCACTGGC
AGTCAGGTCA GTGCGGGCAC CAGCTCTTCA GCCGTATCGT TGACCGGGGC AGATGCGTTG
ATTGTCGGTA GCGTGCTGAC AGGTGGCGCG GATGGCCTGG GGATGGGCAA TGAAAGTGCA
CGACTGGTCG GTTCCACGGC CACCGTCATC GGCAGCACGA TCACGGCCAC GAATCGCGGG
ATAAACGCCG GCTCGCTCAG CAACCTGACC CTGGAAGGTA CTTCAGTAAC GGCCACTGGC
GCCAATGGCA GAGGCATGGA GATGTGGGAC TCCACAGTGA AGGCGTCCGG CAGCACCATC
ACCGGGCAGC AATATGGCGT GCGCTTGCGC GCTGACCCGG CCGTACCCTC AAGCAATCAG
CTGGTTCTGG ACGGAACCCG GGTCGAAGGT ATCACGGGGT CGGCGCTGAT CGTCGGAATG
CCCACCGGCG CGCCCGCGAC TGCCGATATC CGGGTCAACA ATGGTTCTAC GCTGACCGGC
GGCAACGGCC GGATACTGGA GTTGATCAAC GGTTCAACGG CTCATATGAC CGTGGACAAC
AGCCATCTGC TGGGCGATGT ATCGGCGGAT GCGGGCAGTA CCGCCAGCCT GTCACTGCAA
AATAACGCGA CCCTGACCGG GCGCCTGGAG AACGTCTCCA GCCTGTCGCT CAGTAGTCAG
GGCCAGTGGG TGATGGTCGA GAACGGTCAG GTGAATGCAT TGGCCATGGA CGGTGGGTCG
GTCAGGTTTG GCGACGCGGC CTCGTTTTAC ACGTTGTCAC TCGCAAGCCT GTCAGGGAGC
GGTACGTTCA TGATGGACGT GGATTTCGCT GGCAAGGCCA ATGACTTTCT TGACATCACG
GGCAGCGCGA CCGGCAGTCA TACCTTGCTT GTCGGTAGCA CGGGTGTCGA TCCGCTCAGC
GATACCAGCC TGCACGTCGT GCATGCGGCA GCCGGCGATG CCAGCTTTTC GCTCGCAGGC
GGCGCAGTGG ATCTGGGCGC CTGGTCCTAT GACCTGATCA AGCAGGGCGA CAATGACTGG
TATCTGGATA CCGCCACCCG AACCATCAGC CCCGGCGCAC AGACTGTCAT GGCGTTGTTC
AACACTGCGC CGACTGTCTG GTATGGGGAG GTGAGTACGT TACGTTCGCG CATGGGCGAG
TTGCGCATGG ATGAGGCCCG TTCTGGCGGC TGGATACGTA CCTACGGCAA CAAATTCAAT
GTGGCCGACG CCTCAGGCTT CGGATATCAG CAGGTTCAGA GTGGTGTCGC GCTCGGCGCA
GATGGCAAGC TGCCTGTGGG GGCGGGGCAA TGGCTGGCGG GCGTGATGAT CGGGCAGAGC
ACCTCTGACC TCAGTCTGGA TCACGGTGCC AGTGGCAAGG TCGACAGCTA TTCGCTGGGC
GCTTACAGCA CCTGGCTGAA CAGCGAGAGC GGCTACTACA TCGATGGCGT GATCAAACTC
AATCAGTTCA AAAACAAGGC CAGAGTCAAT CTCAGCGATG GTTCCCGCAC GCGCGGCAAC
TACGACAATC TGGGGGTTGG CGCATCGCTG GAGCTGGGGC GGCACATCAA ACTGGACAAC
GGTTATTTTC TCGAACCCTA CACCCAGCTG GCGGGCCTGG TCGTTCAGGG CAAGGACTAC
GCACTGGACA ACGGTATGCG TGCTGAAGGT GACCGCAGCC GATCGCTGCT CGGCAAGGTC
GGTACGACGG CGGGGCGCAG TTTCGACCTG GGCAAAGGAC GTACGCTGCA ACCTTATGTG
CGGGTTGCCG TGGCTCACGA ATTCGTCAAC AGGAACGAGG TCAAGGTCAA TGACAACGTG
TTCAACAACG ACCTCTCCGG TTCCCGTGGC GAATTGGGGA CGGGCGTTTC GGTGTCGCTG
TCTGACAACC TGCAGTTGCA TGCTGATTTC GATTACAGCA ATGGCGATGC CATCGAACAG
CCGTGGGGCG CCAGTGCAGG CTTGCGTTAC AGCTGGTAG
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| Protein sequence | MNAPFVLRPL SWTLKTVIFL SPLLPGSHAF AQILVNAPQT IDATGPLDSY RVVSTGNLTA
NGATTLQIST ITGAKLTLTG SQVSAGTSSS AVSLTGADAL IVGSVLTGGA DGLGMGNESA
RLVGSTATVI GSTITATNRG INAGSLSNLT LEGTSVTATG ANGRGMEMWD STVKASGSTI
TGQQYGVRLR ADPAVPSSNQ LVLDGTRVEG ITGSALIVGM PTGAPATADI RVNNGSTLTG
GNGRILELIN GSTAHMTVDN SHLLGDVSAD AGSTASLSLQ NNATLTGRLE NVSSLSLSSQ
GQWVMVENGQ VNALAMDGGS VRFGDAASFY TLSLASLSGS GTFMMDVDFA GKANDFLDIT
GSATGSHTLL VGSTGVDPLS DTSLHVVHAA AGDASFSLAG GAVDLGAWSY DLIKQGDNDW
YLDTATRTIS PGAQTVMALF NTAPTVWYGE VSTLRSRMGE LRMDEARSGG WIRTYGNKFN
VADASGFGYQ QVQSGVALGA DGKLPVGAGQ WLAGVMIGQS TSDLSLDHGA SGKVDSYSLG
AYSTWLNSES GYYIDGVIKL NQFKNKARVN LSDGSRTRGN YDNLGVGASL ELGRHIKLDN
GYFLEPYTQL AGLVVQGKDY ALDNGMRAEG DRSRSLLGKV GTTAGRSFDL GKGRTLQPYV
RVAVAHEFVN RNEVKVNDNV FNNDLSGSRG ELGTGVSVSL SDNLQLHADF DYSNGDAIEQ
PWGASAGLRY SW
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