Gene Psyr_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2027 
Symbol 
ID3367541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2351440 
End bp2352294 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content63% 
IMG OID637652376 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_235108 
Protein GI66045267 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.56393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTTTA GCGTGGAGGA AGTGCGTTTC AATCTGGGGC ATATCGAACT GGCTGCCCAT 
CTTTACGGCC CCGAGGACGG CCGGCCGGTG ATTGCCGTGC ACGGCTGGCT CGACAATGCC
AACAGCTTTG CCCGCCTGGC GCCGCAACTG GATGGCCTGC GCATCGTGGC GCTCGATCTG
GCCGGGCATG GTCATTCAGC GCATAGGCCT GCCGGGGCGT CCTATGCGCT GGCCGACTAC
GTGTTCGACG TGCTGCAGGT CGCCGAGCAA TTGGGCTGGC AGCGCTTTGC CCTGATGGGC
CATTCACTGG GCGCGATCAT TTCGGTATTG CTGGCCGGGT CGTTGCCGGA GCGTGTCACG
CGGCTGGCAC TGATCGACGG TTTGATTCCC TTGACCGGCG ACCCCGAATC CGCCGCCGAG
CGGATGGGCT CCGCGCTGCA GGCGCAGCTC AGGCTGTCGG GCAAGAAAAA GCCGGTTTAC
GAGGATCAGC AACGCGCTGT TCAGGCGCGT ATGAAAGGCG TCGTCCCGGT CAGTCGCGAG
GCTGCCGAAT TACTCGCGCA ACGCGGCCTG ATGCCGGTAC CCGGCGGCTA TACCTGGCGC
AGCGACAGCC GCCTGACGCT GCCATCTGCG ATACGTCTTA CACATCAGCA GGCGATGTCT
TTCGTCAACG CTATCCGTTG CCCGACGCAA CTGCTGGTCG CTACAGGCGG CATGCTGACG
AAAAATCAGC TCATGCTGTC CGGGCTGCCT TTCGACGTCG TGCAGCTTGA AGGCGGTCAT
CATCTGCACC TGGACGACGA GCAGGGCGCG AGCGCTGTTG CACACTGTAT CAATCGCTTC
TTCGCTGCTT CTTGA
 
Protein sequence
MTFSVEEVRF NLGHIELAAH LYGPEDGRPV IAVHGWLDNA NSFARLAPQL DGLRIVALDL 
AGHGHSAHRP AGASYALADY VFDVLQVAEQ LGWQRFALMG HSLGAIISVL LAGSLPERVT
RLALIDGLIP LTGDPESAAE RMGSALQAQL RLSGKKKPVY EDQQRAVQAR MKGVVPVSRE
AAELLAQRGL MPVPGGYTWR SDSRLTLPSA IRLTHQQAMS FVNAIRCPTQ LLVATGGMLT
KNQLMLSGLP FDVVQLEGGH HLHLDDEQGA SAVAHCINRF FAAS